RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FBXO9Q9UK97 447 aaPredicted RBP14.38□□□□□ -0.11
LSM6-201ENST00000296581 CBLCQ9ULV8 474 aa14.38□□□□□ -0.11
LSM6-201ENST00000296581 ELK4P28324 431 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 PPICP45877 212 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 OCA2Q04671 838 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 ZNF141Q15928 474 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.37□□□□□ -0.11
LSM6-201ENST00000296581 ENTPD8Q5MY95 495 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 PGBD2Q6P3X8 592 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 BCORP1Q8N888 145 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 MORN4Q8NDC4 146 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 RNF31Q96EP0 1072 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 APOL4Q9BPW4 351 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 DGCR6LQ9BY27 220 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 POLR2J2Q9GZM3 115 aaKnown RBP14.37□□□□□ -0.11
LSM6-201ENST00000296581 OR8D2Q9GZM6 311 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 POLR2J3Q9H1A7 115 aaKnown RBP14.37□□□□□ -0.11
LSM6-201ENST00000296581 GPR179Q6PRD1 2367 aa14.37□□□□□ -0.11
LSM6-201ENST00000296581 FAM86C2PA6NEL3 165 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 CPSF4LA6NMK7 179 aaKnown RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 OR10H3O60404 316 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 CYP7B1O75881 506 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 OR5F1O95221 314 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 PLAURQ03405 335 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 ST3GAL3Q11203 375 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 FOXD4Q12950 439 aaPredicted RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 TRAM2Q15035 370 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 MEP1AQ16819 746 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 RBM48Q5RL73 367 aaKnown RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 C6orf141Q5SZD1 244 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 LAIR2Q6ISS4 152 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 KLHL17Q6TDP4 642 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 OVCH1Q7RTY7 1134 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 CCDC71Q8IV32 467 aaPredicted RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 GTPBP3Q969Y2 492 aaKnown RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 C12orf43Q96C57 262 aaKnown RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 NUDT9Q9BW91 350 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 VSTM2BA6NLU5 285 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 ZNF701M0R085 212 aaPredicted RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 CDX4O14627 284 aaPredicted RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 CD59P13987 128 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 POU2F1P14859 743 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 DRD5P21918 477 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 IFNA8P32881 189 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 RFX3P48380 749 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 PSMD4P55036 377 aaKnown RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 HOXC5Q00444 222 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 MC2RQ01718 297 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 NNATQ16517 81 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 CLVS1Q8IUQ0 354 aaPredicted RBP14.36□□□□□ -0.11
LSM6-201ENST00000296581 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 OR4K5Q8NGD3 323 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 ADAMTS16Q8TE57 1224 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 RXFP3Q9NSD7 469 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 SACM1LQ9NTJ5 587 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 ERGIC3Q9Y282 383 aa14.36□□□□□ -0.11
LSM6-201ENST00000296581 LOC105371267A0A1B0GV96 52 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 FMO6PO60774 539 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 ZNF806P0C7X5 589 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 GGT2P36268 569 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 ESRRGP62508 458 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 CDK5R2Q13319 367 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 ZSWIM7Q19AV6 140 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 PDZK1Q5T2W1 519 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 LANCL3Q6ZV70 420 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 PLEKHM3Q6ZWE6 761 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 RANBP3LQ86VV4 465 aaPredicted RBP14.35□□□□□ -0.11
LSM6-201ENST00000296581 SLC38A4Q969I6 547 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 UCK2Q9BZX2 261 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 SLC26A1Q9H2B4 701 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 FBXO8Q9NRD0 319 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 REV1Q9UBZ9 1251 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 NTNG1Q9Y2I2 539 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 PCDHGA6Q9Y5G7 932 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 A0A087WXM4 84 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 FRG2CA6NGY1 282 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 TMX2-CTNND1H3BSU7 103 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 POLR1CO15160 346 aaPredicted RBP14.35□□□□□ -0.11
LSM6-201ENST00000296581 CPNE3O75131 537 aaKnown RBP14.35□□□□□ -0.11
LSM6-201ENST00000296581 THY1P04216 161 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 CCKBRP32239 447 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 HLCSP50747 726 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 ATP12AP54707 1039 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 UGT2B15P54855 530 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 CDH15P55291 814 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 DCAF7P61962 342 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 IL5RAQ01344 420 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 TOP3AQ13472 1001 aaPredicted RBP14.35□□□□□ -0.11
LSM6-201ENST00000296581 CD300LDQ6UXZ3 194 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 SHISA6Q6ZSJ9 500 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 TOR1AIP2Q8NFQ8 470 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 OR1N1Q8NGS0 311 aa14.35□□□□□ -0.11
LSM6-201ENST00000296581 NXF5Q9H1B4 397 aaKnown RBP14.35□□□□□ -0.11
LSM6-201ENST00000296581 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms