RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PCDHGA6Q9Y5G7 932 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PCDHGA10Q9Y5H3 936 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 LOC105369274A0A096LPK9 316 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PQ72 361 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TCRBV5S2A0A599 114 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 C5orf51A6NDU8 294 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ARHGAP33O14559 1287 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TSPAN4O14817 238 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RGS6P49758 472 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SGCAQ16586 387 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PUS10Q3MIT2 529 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ANKRD54Q6NXT1 300 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR4N4Q8N0Y3 316 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 VWA5B2Q8N398 1253 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PARP16Q8N5Y8 322 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CELF2-AS1Q8N7Q2 184 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR13H1Q8NG92 308 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR2AJ1Q8NGZ0 328 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 POP5Q969H6 163 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR1F2PQ96R84 312 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ORAI3Q9BRQ5 295 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF443Q9Y2A4 671 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 MED16Q9Y2X0 877 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PCDHGA2Q9Y5H1 932 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 DICER1Q9UPY3 1922 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 AHCTF1Q8WYP5 2266 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OTOL1A6NHN0 477 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF726A6NNF4 738 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 AREL1O15033 823 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 DRD2P14416 443 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CSNK1G2P78368 415 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ACVR1Q04771 509 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RAB30Q15771 203 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TMEM225Q6GV28 225 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 METTL4Q8N3J2 472 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FBXL6Q8N531 539 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR5M1Q8NGP8 315 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CHTF18Q8WVB6 975 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FATE1Q969F0 183 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZDHHC5Q9C0B5 715 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF385DQ9H6B1 395 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF670-ZNF695F2Z2N8 137 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TEX46H3BTG2 121 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FMO6PO60774 539 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 HCKP08631 526 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ITGA5P08648 1049 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF24P17028 368 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 HOXD12P35452 270 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ADAM8P78325 824 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CBLBQ13191 982 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ELOCQ15369 112 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR1Q1Q15612 314 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 NDUFA5Q16718 116 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CCSAPQ6IQ19 270 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZCCHC12Q6PEW1 402 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 Q6ZNB5 142 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 ACBD7Q8N6N7 88 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TEX19Q8NA77 164 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR4K17Q8NGC6 315 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR1E3Q8WZA6 343 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ANKRD10Q9NXR5 420 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PLCL2Q9UPR0 1127 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SBF1O95248 1867 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 LAMA2P24043 3122 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 H0YIV9 168 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 AQP9O43315 295 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 UGDHO60701 494 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PROS1P07225 676 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RNH1P13489 461 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 KCNJ10P78508 379 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ARFRP1Q13795 201 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SLC35D2Q76EJ3 337 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 NKAIN4Q8IVV8 208 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CHCHD4Q8N4Q1 142 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 DNAJC22Q8N4W6 341 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR13F1Q8NGS4 319 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 KCNN1Q92952 543 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 MS4A4EQ96PG1 132 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FAM83CQ9BQN1 747 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 GXYLT2A0PJZ3 443 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZSCAN5BA6NJL1 495 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 A8MVJ9 347 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 LRRN3E7EW58 273 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 LRRTM2O43300 516 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PRICKLE3O43900 615 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 CD160O95971 181 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 DCNP07585 359 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 CD3GP09693 182 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF20P17024 532 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ATP5A1P25705 553 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 RPS27P42677 84 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 VASPP50552 380 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 GABARAPL2P60520 117 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TFF2Q03403 129 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms