RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 C4orf36Q96KX1 117 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 VN1R3Q9BXE9 311 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 LRRN3Q9H3W5 708 aa12.54□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM129A0AVI4 362 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 OR52A4PA6NMU1 304 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 RNF13O43567 381 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ALDOBP05062 364 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 RAB3BP20337 219 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 PGGHGQ32M88 737 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 Q6ZNB5 142 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 GJD3Q8N144 294 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SETD7Q8WTS6 366 aaKnown RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 FGF13Q92913 245 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 MSLNLQ96KJ4 702 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SFXN1Q9H9B4 322 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 NLGN3Q9NZ94 848 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 A8MVJ9 347 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 FLRT2O43155 660 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SOD1P00441 154 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 TCRBP04435 133 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 PROS1P07225 676 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 EDNRAP25101 427 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ITGB7P26010 798 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SOX2P48431 317 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 AKR1D1P51857 326 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 TSPAN31Q12999 210 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM240Q5SV17 173 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 FIGNL1Q6PIW4 674 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 FAM83HQ6ZRV2 1179 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ADGRF3Q8IZF5 1079 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF680Q8NEM1 530 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 WSB2Q9NYS7 404 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 MGAT4CQ9UBM8 478 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 FMO6PO60774 539 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 HK1P19367 917 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF628Q5EBL2 1059 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM99Q8N816 258 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
SCAF4-201ENST00000286835 OR8D4Q8NGM9 314 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
SCAF4-201ENST00000286835 LANCL1O43813 399 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 FCMRO60667 390 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 RASGRP1O95267 797 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 CLDN12P56749 244 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 SIM1P81133 766 aaPredicted RBP12.52□□□□□ -0.4
SCAF4-201ENST00000286835 BTN1A1Q13410 526 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 TMEM44Q2T9K0 475 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF770Q6IQ21 691 aaPredicted RBP12.52□□□□□ -0.4
SCAF4-201ENST00000286835 KANSL1Q7Z3B3 1105 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 CPXM2Q8N436 756 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 COX18Q8N8Q8 333 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 VN1R2Q8NFZ6 395 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 OR56A1Q8NGH5 318 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 SPPL3Q8TCT6 385 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.4
SCAF4-201ENST00000286835 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.4
SCAF4-201ENST00000286835 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 DTD2Q96FN9 168 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 OR52D1Q9H346 318 aa12.52□□□□□ -0.4
SCAF4-201ENST00000286835 TRAV27A0A087WT01 109 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 KIAA0355O15063 1070 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ASGR2P07307 311 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 CTSLP07711 333 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 SFXN4Q6P4A7 337 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 KIF18BQ86Y91 864 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ACOT12Q8WYK0 555 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 NXPE2Q96DL1 559 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 OR7D2Q96RA2 312 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 KLHL31Q9H511 634 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 CALML5Q9NZT1 146 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ANTXRLA6NF34 631 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 FAM171A2A8MVW0 826 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 KAT7O95251 611 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 PSMB10P40306 273 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 EEF1A2Q05639 463 aaKnown RBP12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
SCAF4-201ENST00000286835 TNFAIP8L1Q8WVP5 186 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 PMEPA1Q969W9 287 aa12.52□□□□□ -0.41
SCAF4-201ENST00000286835 ORAI1Q96D31 301 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms