RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GABRA4P48169 554 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 RGS6P49758 472 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 SNRPGP62308 76 aaKnown RBP16.61■□□□□ 0.25
CAPN1-201ENST00000279247 PRR22Q8IZ63 422 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 BBS1Q8NFJ9 593 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 TMEM203Q969S6 136 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 DNAJA3Q96EY1 480 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 GAL3ST4Q96RP7 486 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 NRSN2Q9GZP1 204 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 ENKD1Q9H0I2 346 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 OR10A5Q9H207 317 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 SLC25A19Q9HC21 320 aa16.61■□□□□ 0.25
CAPN1-201ENST00000279247 RPL36Q9Y3U8 105 aaKnown RBP16.61■□□□□ 0.25
CAPN1-201ENST00000279247 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 C17orf105B2RV13 164 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 OR5F1O95221 314 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 GCGRP47871 477 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 CDK5Q00535 292 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 GRM7Q14831 915 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 DESI1Q6ICB0 168 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 OR6C4Q8NGE1 309 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 OR4C3Q8NH37 302 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 C6orf62Q9GZU0 229 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-201ENST00000279247 TRAV27A0A087WT01 109 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 MAKP20794 623 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 CCR4P51679 360 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 NR1D2Q14995 579 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 OR2G6Q5TZ20 316 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 MBOAT2Q6ZWT7 520 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 TMEM151BQ8IW70 566 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 LINC00471Q8N535 108 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 CAMKK1Q8N5S9 505 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 OR2I1PQ8NGU4 316 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 TMEM80Q96HE8 168 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 SLC38A2Q96QD8 506 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 MED20Q9H944 212 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 PMF1-BGLAPU3KQ54 211 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 MPDZO75970 2070 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 CNTRLQ7Z7A1 2325 aa16.6■□□□□ 0.25
CAPN1-201ENST00000279247 ZC3H12DA2A288 527 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ARHGAP33O14559 1287 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 MYL12BO14950 172 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 NKX2-2O95096 273 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SLC16A1P53985 500 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 CSTF1Q05048 431 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 AP1ARQ63HQ0 302 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SLC46A3Q7Z3Q1 461 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ZNF595Q8IYB9 648 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 OR13C2Q8NGS9 318 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 OR1L3Q8NH93 324 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 TMEM239Q8WW34 195 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 PRSS27Q9BQR3 290 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 POLDIP3Q9BY77 421 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 Q9N2J8 555 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 WDR70Q9NW82 654 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 THBS1P07996 1170 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SERPINB10P48595 397 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ITGADQ13349 1161 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 DECR1Q16698 335 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 DGUOKQ16854 277 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 LHFPL3Q86UP9 236 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SDR16C5Q8N3Y7 309 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ZFP41Q8N8Y5 198 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ANKK1Q8NFD2 765 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 CLDN23Q96B33 292 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 VSTM2LQ96N03 204 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 DPYSL5Q9BPU6 564 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 POLR2J2Q9GZM3 115 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SATB2Q9UPW6 733 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 CSO75390 466 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 ATP1A4Q13733 1029 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 MOGQ16653 247 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 WDR45BQ5MNZ6 344 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 LIPKQ5VXJ0 399 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 SLC36A4Q6YBV0 504 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 GHDCQ8N2G8 530 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 TRUB1Q8WWH5 349 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 RNFT2Q96EX2 444 aa16.59■□□□□ 0.25
CAPN1-201ENST00000279247 CNOT2Q9NZN8 540 aaKnown RBP16.59■□□□□ 0.25
CAPN1-201ENST00000279247 LRRN3E7EW58 273 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 DUX1O43812 170 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 MRPS14O60783 128 aaKnown RBP16.58■□□□□ 0.24
CAPN1-201ENST00000279247 RPLP0P05388 317 aaKnown RBP16.58■□□□□ 0.24
CAPN1-201ENST00000279247 IDUAP35475 653 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 HSD11B2P80365 405 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 TCTE1Q5JU00 501 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 RASSF6Q6ZTQ3 369 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 OR4F15Q8NGB8 312 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 OR52I1Q8NGK6 324 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 LRRN3Q9H3W5 708 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 TMEM27Q9HBJ8 222 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 FLRT3Q9NZU0 649 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 SMIM30A4D0T7 59 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 RFPL3O75679 317 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 CT45A8P0DMV1 189 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 CT45A9P0DMV2 189 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms