RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TBXA2RP21731 343 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 PRPH2P23942 346 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 EDNRAP25101 427 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 GABRA3P34903 492 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 GSTM5P46439 218 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 NR1H2P55055 460 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 HSPB3Q12988 150 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 TSC22D1Q15714 1073 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 DUSP5Q16690 384 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 DECR1Q16698 335 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 WHAMMP3Q1A5X7 153 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 GLYR1Q49A26 553 aaPredicted RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 CLEC6AQ6EIG7 209 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 NOXRED1Q6NXP6 359 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 ZYG11AQ6WRX3 759 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 ZNF704Q6ZNC4 412 aaPredicted RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 GSPT2Q8IYD1 628 aaKnown RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 GTPBP8Q8N3Z3 284 aaPredicted RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 LRRN4CLQ8ND94 238 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 MAPK1IP1LQ8NDC0 245 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 OR6K3Q8NGY3 331 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 RAB3IL1Q8TBN0 382 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 NUDT8Q8WV74 236 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 NEUROG1Q92886 237 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 CAVIN3Q969G5 261 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 C16orf58Q96GQ5 468 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 RNF145Q96MT1 663 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 SRXN1Q9BYN0 137 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 SHCBP1LQ9BZQ2 653 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 TMEM185BQ9H7F4 350 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 Q9N2J8 555 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 EQTNQ9NQ60 294 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 SIRT3Q9NTG7 399 aaPredicted RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 GIMAP4Q9NUV9 329 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 MED17Q9NVC6 651 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 SENP1Q9P0U3 644 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 NTMQ9P121 344 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 ING1Q9UK53 422 aaPredicted RBP7.99□□□□□ -1.13
TPM3-201ENST00000271850 GRID1Q9ULK0 1009 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 RTTNQ86VV8 2226 aa7.99□□□□□ -1.13
TPM3-201ENST00000271850 ANK2Q01484 3957 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 C7orf72A4D263 438 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 TNFSF11O14788 317 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 RSL1D1O76021 490 aaKnown RBP7.98□□□□□ -1.13
TPM3-201ENST00000271850 SLITRK5O94991 958 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 KCNK2O95069 426 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SHBGP04278 402 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 NGFRP08138 427 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SOD3P08294 240 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 LINGO3P0C6S8 592 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 ZNF17P17021 662 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SDC1P18827 310 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 FPR1P21462 350 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 AGTR1P30556 359 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 NTSP30990 170 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 KCNJ5P48544 419 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 PRIM2P49643 509 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 EEFSECP57772 596 aaKnown RBP7.98□□□□□ -1.13
TPM3-201ENST00000271850 SLC18A2Q05940 514 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 C17orf67Q0P5P2 114 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 PDE7AQ13946 482 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SLC29A2Q14542 456 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SPDYAQ5MJ70 313 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.98□□□□□ -1.13
TPM3-201ENST00000271850 CCNJQ5T5M9 372 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 IKBIPQ70UQ0 350 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 CHMP1BQ7LBR1 199 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 NUFIP2Q7Z417 695 aaKnown RBP7.98□□□□□ -1.13
TPM3-201ENST00000271850 LCA5Q86VQ0 697 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 SLC22A9Q8IVM8 553 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 CCNYL1Q8N7R7 359 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 CLHC1Q8NHS4 586 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 PLPPR2Q96GM1 343 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 GMPPAQ96IJ6 420 aaPredicted RBP7.98□□□□□ -1.13
TPM3-201ENST00000271850 SLC39A3Q9BRY0 314 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 ACTR6Q9GZN1 396 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 PTGES2Q9H7Z7 377 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 COQ10BQ9H8M1 238 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 MIEF1Q9NQG6 463 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 ABCA1O95477 2261 aa7.98□□□□□ -1.13
TPM3-201ENST00000271850 NPIPA5A0A0B4J1W7 369 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 NPIPA7E9PJI5 369 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 OVOL3O00110 214 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 HS3ST1O14792 307 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 PLIN3O60664 434 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 TBX19O60806 448 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 GSTA1P08263 222 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 DANCRP0C864 163 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 NPIPA8P0DM63 369 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 PRPS2P11908 318 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 PSMB1P20618 241 aaKnown RBP7.97□□□□□ -1.13
TPM3-201ENST00000271850 ARRB2P32121 409 aa7.97□□□□□ -1.13
TPM3-201ENST00000271850 FOXF1Q12946 379 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms