RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 AGR2O95994 175 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 THBS1P07996 1170 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 SLC2A2P11168 524 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 HTR2AP28223 471 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 IFNA8P32881 189 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 WASP42768 502 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 CLDN20P56880 219 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 DAB2P98082 770 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TNFRSF17Q02223 184 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 QPRTQ15274 297 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 DUSP5Q16690 384 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TIGD3Q6B0B8 471 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 FBXO42Q6P3S6 717 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 NIPAL3Q6P499 406 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 SMARCD3Q6STE5 483 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 WDR88Q6ZMY6 472 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 CACUL1Q86Y37 369 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 FGF14Q92915 247 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 AHCYL2Q96HN2 611 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 SDF2Q99470 211 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TTYH2Q9BSA4 534 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 MARVELD1Q9BSK0 173 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 ENKD1Q9H0I2 346 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 ISG20L2Q9H9L3 353 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 TBC1D17Q9HA65 648 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 SLC7A7Q9UM01 511 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 C2orf92A0A1B0GVN3 265 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 RNF13O43567 381 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 DNAJB6O75190 326 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 EML2O95834 649 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 YES1P07947 543 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 LAMP2P13473 410 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 ZNF24P17028 368 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 MAKP20794 623 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 THBS2P35442 1172 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 MTNR1BP49286 362 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 RPS21P63220 83 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 RUNX2Q13950 521 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 MAPK14Q16539 360 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 PARM1Q6UWI2 310 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 CXXC5Q7LFL8 322 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 C11orf74Q86VG3 221 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 GLCCI1Q86VQ1 547 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 LSRQ86X29 649 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TRIM48Q8IWZ4 208 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 LRRC25Q8N386 305 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 APOOQ9BUR5 198 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 PHF7Q9BWX1 381 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 PLA2G2FQ9BZM2 168 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 ZNF350Q9GZX5 532 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 PAQR5Q9NXK6 330 aaPredicted RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 BABAM2Q9NXR7 383 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 OR6C2Q9NZP2 312 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 TNFRSF10DQ9UBN6 386 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 IL20RAQ9UHF4 553 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 KCNE5Q9UJ90 142 aa11.57□□□□□ -0.56
BEST3-201ENST00000266661 MDC1Q14676 2089 aaKnown RBP11.57□□□□□ -0.56
BEST3-201ENST00000266661 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 CD8B2A6NJW9 211 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 SLC19A2O60779 497 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 ZNF888P0CJ79 500 aaPredicted RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 CD8BP10966 210 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 PRG2P13727 222 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 MAP3K8P41279 467 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 GCGRP47871 477 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 SOX9P48436 509 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 CLDN2P57739 230 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 RPS15AP62244 130 aaKnown RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 PLAURQ03405 335 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 MADCAM1Q13477 382 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 KRT33BQ14525 404 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 SF3A2Q15428 464 aaKnown RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 TATDN3Q17R31 274 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 MZT2AQ6P582 158 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 USP53Q70EK8 1073 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 UTS2BQ765I0 119 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 MEPCEQ7L2J0 689 aaKnown RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 GID4Q8IVV7 300 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 RNF113BQ8IZP6 322 aaKnown RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 UBE2J2Q8N2K1 259 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 LNX2Q8N448 690 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 ACBD7Q8N6N7 88 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 TMEM99Q8N816 258 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 ZFPM2Q8WW38 1151 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 ACOT12Q8WYK0 555 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 UPRTQ96BW1 309 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 FCRL4Q96PJ5 515 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 HCAR1Q9BXC0 346 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 TEX12Q9BXU0 123 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 SLC17A9Q9BYT1 436 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
BEST3-201ENST00000266661 OR52D1Q9H346 318 aa11.56□□□□□ -0.56
BEST3-201ENST00000266661 TRIM45Q9H8W5 580 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms