RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 C3orf30Q96M34 536 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 WFIKKN1Q96NZ8 548 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ALPK1Q96QP1 1244 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 PINK1Q9BXM7 581 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 ROPN1BQ9BZX4 212 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 ROPN1Q9HAT0 212 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 HHATLQ9HCP6 504 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 SIRT3Q9NTG7 399 aaPredicted RBP8.75□□□□□ -1.01
VPS41-201ENST00000265745 FBXO34Q9NWN3 711 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 NDRG3Q9UGV2 375 aa8.75□□□□□ -1.01
VPS41-201ENST00000265745 A0A087WZY1 265 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 A0A1W2PRB8 838 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SCAMP2O15127 329 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 GMFGO60234 142 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 PEX11AO75192 247 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS41-201ENST00000265745 SASH3O75995 380 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 AQP8O94778 261 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 ATE1O95260 518 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SLU7O95391 586 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 RAF1P04049 648 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 ALOX5P09917 674 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 CREB1P16220 341 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 DDX5P17844 614 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 KLK2P20151 261 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 EFNA1P20827 205 aaPredicted RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 PSMA4P25789 261 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 GSTT1P30711 240 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 LCN1P31025 176 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 CPOXP36551 454 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SERPINB5P36952 375 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 CD79BP40259 229 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 RPS3AP61247 264 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 KEAP1Q14145 624 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 XKR7Q5GH72 579 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 C6orf136Q5SQH8 315 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 ZCCHC23Q6ZST2 131 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SZRD1Q7Z422 152 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 GGNQ86UU5 652 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 GTPBP8Q8N3Z3 284 aaPredicted RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 OR7A2PQ8NGA2 310 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 PSMA8Q8TAA3 256 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 FBXO30Q8TB52 745 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 AGR3Q8TD06 166 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 ACTRT2Q8TDY3 377 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 AENQ8WTP8 325 aaKnown RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 SMPDL3BQ92485 455 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 SLC39A3Q9BRY0 314 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 OPN3Q9H1Y3 402 aaPredicted RBP8.74□□□□□ -1.01
VPS41-201ENST00000265745 UBQLN4Q9NRR5 601 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 DUSP22Q9NRW4 184 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 GIN1Q9NXP7 522 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 ELOVL5Q9NYP7 299 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 STOML1Q9UBI4 398 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 GIMAP2Q9UG22 337 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 VDAC3Q9Y277 283 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
VPS41-201ENST00000265745 C7orf72A4D263 438 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 C16orf97H3BN30 126 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 ADAMDEC1O15204 470 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CTIFO43310 598 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 LYPLA1O75608 230 aaPredicted RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 HSPA4LO95757 839 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 HMGN2P05204 90 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 BPGMP07738 259 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CD8BP10966 210 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 HPGDP15428 266 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 ZNF17P17021 662 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 PRPS1L1P21108 318 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 UGT2B10P36537 528 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 HPCAL1P37235 193 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 RPL3P39023 403 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 ETV4P43268 484 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 SLC6A8P48029 635 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CCT3P49368 545 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 PRIM2P49643 509 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 SIRPAP78324 504 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 ADAM8P78325 824 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 FGFBP1Q14512 234 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 PTGR1Q14914 329 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 POU4F3Q15319 338 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 SGCBQ16585 318 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CTU2Q2VPK5 515 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 DEFB113Q30KQ7 82 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 ATP6AP1LQ52LC2 224 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CCNJQ5T5M9 372 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 CPTPQ5TA50 214 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 IL23RQ5VWK5 629 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 EMBQ6PCB8 327 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 WDR75Q8IWA0 830 aaKnown RBP8.73□□□□□ -1.01
VPS41-201ENST00000265745 KRTCAP2Q8N6L1 136 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 NATD1Q8N6N6 113 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 COX18Q8N8Q8 333 aa8.73□□□□□ -1.01
VPS41-201ENST00000265745 ZNF610Q8N9Z0 462 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms