RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 RAB39AQ14964 217 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 MAPK14Q16539 360 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 C7orf57Q8NEG2 295 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR4D9Q8NGE8 314 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR5L2Q8NGL0 311 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 FANK1Q8TC84 345 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 CEP19Q96LK0 163 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 TBX5Q99593 518 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 VN1R1Q9GZP7 353 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 HOXD1Q9GZZ0 328 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 GPR27Q9NS67 375 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 TUBA8Q9NY65 449 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 FBXO4Q9UKT5 387 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 RNF6Q9Y252 685 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 CEP250Q9BV73 2442 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 TRBV11-1A0A0K0K1C0 115 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 A0A1W2PQM1 296 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 EFCAB10A6NFE3 127 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ALOX12BO75342 701 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR5F1O95221 314 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 MED26O95402 600 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 HLA-DQA2P01906 255 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 GIPRP48546 466 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 SERPINB10P48595 397 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ISL1P61371 349 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 PMS2P3Q13401 168 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 SEC23BQ15437 767 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 GDF7Q7Z4P5 450 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 IL22RA1Q8N6P7 574 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR2T33Q8NG76 320 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR4D11Q8NGI4 311 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 SAMD8Q96LT4 415 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OCIAD1Q9NX40 245 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 TMEM184BQ9Y519 407 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZFHX2Q9C0A1 2572 aaPredicted RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 BDP1A6H8Y1 2624 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 IGHV5-10-1A0A0J9YXX1 117 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 A0A1W2PRQ8 180 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SERINC4A6NH21 518 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 BRINP1O60477 761 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 UBL4AP11441 157 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 GP1BBP13224 206 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 CDH11P55287 796 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 PGBD2Q6P3X8 592 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 BCORP1Q8N888 145 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZNF248Q8NDW4 579 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 OR4C3Q8NH37 302 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 RFKQ969G6 155 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 BPIFA2Q96DR5 249 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 HRASLS5Q96KN8 279 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 C5orf34Q96MH7 638 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZNF639Q9UID6 485 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TMEM5Q9Y2B1 443 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 UNC119BA6NIH7 251 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TTC36A6NLP5 189 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TRMUO75648 421 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 CCL4P13236 92 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 C21orf33P30042 268 aaPredicted RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 CRYBA2P53672 197 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SPEM2Q0P670 501 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SF3A2Q15428 464 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 DCAF12Q5T6F0 453 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZER1Q7Z7L7 766 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 B3GNT8Q7Z7M8 397 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 CARFQ8N187 725 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 VMP1Q96GC9 406 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SLC41A2Q96JW4 573 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 EDEM2Q9BV94 578 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZNF768Q9H5H4 540 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 A4GNTQ9UNA3 340 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TPRP12270 2363 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 A0A1B0GWA3 101 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 DLGAP1O14490 977 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 NKX2-2O95096 273 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ITIH1P19827 911 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 HOXD12P35452 270 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 EMDP50402 254 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 RPS15P62841 145 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 PSG6Q00889 435 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TIGD6Q17RP2 521 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 CTU2Q2VPK5 515 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 P2RY8Q86VZ1 359 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 OR7G1Q8NGA0 311 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SGCDQ92629 289 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 DIO2Q92813 273 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 TP53INP1Q96A56 240 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZNF501Q96CX3 271 aaPredicted RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 HS6ST2Q96MM7 605 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 POLR2J2Q9GZM3 115 aaKnown RBP8.62□□□□□ -1.03
SSR3-201ENST00000265044 ZNF350Q9GZX5 532 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 RAB33BQ9H082 229 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
SSR3-201ENST00000265044 SPTA1P02549 2419 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PLXND1Q9Y4D7 1925 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 C2orf72A6NCS6 295 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms