RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ANGPTL2Q9UKU9 493 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 BAG5Q9UL15 447 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 YARS2Q9Y2Z4 477 aaKnown RBP8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 IFT52Q9Y366 437 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 DTNAQ9Y4J8 743 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 CPAMD8Q8IZJ3 1885 aa8.93□□□□□ -0.98
SNRNP40-201ENST00000263694 MED19A0JLT2 244 aaPredicted RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 CDHR4A6H8M9 788 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 SERINC4A6NH21 518 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 G3V3Y1 287 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 SCDO00767 359 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 ADAM10O14672 748 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 HS6ST1O60243 411 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 FADS1O60427 444 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 FABP3P05413 133 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 THBS1P07996 1170 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 C1QTNF9P0C862 333 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 UBTFL6P0CB48 400 aaPredicted RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 HPGDP15428 266 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 ITPKBP27987 946 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 IST1P53990 364 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 FGFBP1Q14512 234 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 NTRK2Q16620 822 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 NRF1Q16656 503 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 FNDC7Q5VTL7 733 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 OR5M10Q6IEU7 315 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 MDGA2Q7Z553 956 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 ARMC10Q8N2F6 343 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 TMEM156Q8N614 296 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC15A4Q8N697 577 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 TMEM102Q8N9M5 508 aaPredicted RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 POGLUT1Q8NBL1 392 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 PHOSPHO1Q8TCT1 267 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 RASSF5Q8WWW0 418 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 GEMIN6Q8WXD5 167 aaKnown RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 THAP4Q8WY91 577 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 SH3YL1Q96HL8 342 aaPredicted RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 ARHGDIGQ99819 225 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 DPH1Q9BZG8 443 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 HOXD1Q9GZZ0 328 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 CACYBPQ9HB71 228 aaKnown RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 IL1RAPQ9NPH3 570 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 NDUFAF4Q9P032 175 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC13A4Q9UKG4 626 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 POLHQ9Y253 713 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 CARD8Q9Y2G2 431 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 RAXQ9Y2V3 346 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 DMXL2Q8TDJ6 3036 aa8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 TNRC6AQ8NDV7 1962 aaKnown RBP8.92□□□□□ -0.98
SNRNP40-201ENST00000263694 B4DXG7 233 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 AP3D1O14617 1153 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 FFAR1O14842 300 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 NTN1O95631 604 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ANGPTL1O95841 491 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CST1P01037 141 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CSTAP01040 98 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 IFNW1P05000 195 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CCL3P10147 92 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 NAGAP17050 411 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 EVI2BP34910 448 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 RYKP34925 604 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 MAGEA2P43356 314 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF136P52737 540 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 RGS8P57771 180 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 EFR3AQ14156 821 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 GANABQ14697 944 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 INPP5JQ15735 1006 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 MEP1AQ16819 746 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 PRAMEF20Q5VT98 475 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 RNF220Q5VTB9 566 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 JMJD6Q6NYC1 403 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 OPN5Q6U736 354 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CBLN3Q6UW01 205 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ERMP1Q7Z2K6 904 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 NUP54Q7Z3B4 507 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 TMEM179BQ7Z7N9 219 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 PQLC1Q8N2U9 271 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF527Q8NB42 609 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 DUSP19Q8WTR2 217 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 PMM1Q92871 262 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF524Q96C55 264 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 TBL1XR1Q9BZK7 514 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 NTN4Q9HB63 628 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 AGPAT4Q9NRZ5 378 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 STX18Q9P2W9 335 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 RIMS3Q9UJD0 308 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 TESMINQ9Y4I5 508 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 MAGED1Q9Y5V3 778 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CHCHD2Q9Y6H1 151 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ENPP4Q9Y6X5 453 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 U3KQV3 271 aa8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-201ENST00000263694 CPSF4LA6NMK7 179 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms