RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RIPK1Q13546 671 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 SCARB2Q14108 478 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 KPNB1Q14974 876 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 ADRM1Q16186 407 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 INAQ16352 499 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 CYP27C1Q4G0S4 372 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 COX20Q5RI15 118 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 PRAMEF20Q5VT98 475 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 BICRALQ6AI39 1079 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 AAGABQ6PD74 315 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 CCDC80Q76M96 950 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 NUP54Q7Z3B4 507 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 C16orf62Q7Z3J2 963 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 KRT73Q86Y46 540 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 SULF2Q8IWU5 870 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 CISD2Q8N5K1 135 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 BCORP1Q8N888 145 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 FAM156AQ8NDB6 213 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 BHLHE22Q8NFJ8 381 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 OR5D16Q8NGK9 328 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 SPPL2AQ8TCT8 520 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 GPR151Q8TDV0 419 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 XAGE5Q8WWM1 108 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 FIG4Q92562 907 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 CDS1Q92903 461 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 FAM162AQ96A26 154 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 EFHD2Q96C19 240 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 SNRNP40Q96DI7 357 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 RMND5BQ96G75 393 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 TRNT1Q96Q11 434 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 OR7D2Q96RA2 312 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 NODALQ96S42 347 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 ZNF607Q96SK3 696 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 TRIM8Q9BZR9 551 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 PCDHAC1Q9H158 963 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 PIF1Q9H611 641 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 POLE3Q9NRF9 147 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 EGFL7Q9UHF1 273 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 MRTO4Q9UKD2 239 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 PACSIN3Q9UKS6 424 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 SAMD4AQ9UPU9 718 aaKnown RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 KLF13Q9Y2Y9 288 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-201ENST00000261813 KCNE3Q9Y6H6 103 aa10.6□□□□□ -0.71
PFDN1-201ENST00000261813 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 A0A0G2JPF8 293 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 HNRNPCL2B2RXH8 293 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 HNRNPCL3B7ZW38 293 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 TP53I11O14683 189 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 PEX1O43933 1283 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 RASAL1O95294 804 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 IL33O95760 270 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 P04436 131 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 GPIP06744 558 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 HNRNPCL4P0DMR1 293 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 OR12D1P0DN82 309 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 PSMA4P25789 261 aaKnown RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 KDELR2P33947 212 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 DNASE1L1P49184 302 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 MEOX1P50221 254 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 MS4A2Q01362 244 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SRSF1Q07955 248 aaKnown RBP eCLIP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 INPP5JQ15735 1006 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 TNFAIP8L2Q6P589 184 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 GALNT10Q86SR1 603 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SPATA24Q86W54 205 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 PTOV1Q86YD1 416 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 BBS10Q8TAM1 723 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 FAM110BQ8TC76 370 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SLC26A7Q8TE54 656 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 WDR60Q8WVS4 1066 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 OIT3Q8WWZ8 545 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 LZICQ8WZA0 190 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 DIO2Q92813 273 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 NTNG2Q96CW9 530 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 RSRC1Q96IZ7 334 aaKnown RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 FRMD6Q96NE9 622 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 COL21A1Q96P44 957 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SECISBP2Q96T21 854 aaKnown RBP10.59□□□□□ -0.71
PFDN1-201ENST00000261813 BTBD2Q9BX70 525 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 UGT2B28Q9BY64 529 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 YY1AP1Q9H869 796 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 BCL2L10Q9HD36 194 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 SACM1LQ9NTJ5 587 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 OLAHQ9NV23 265 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 ADPRHL2Q9NX46 363 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 FLRT3Q9NZU0 649 aa10.59□□□□□ -0.71
PFDN1-201ENST00000261813 UBR5O95071 2799 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-201ENST00000261813 KCNK2O95069 426 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 CYP4B1P13584 511 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 ETS2P15036 469 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 CNR1P21554 472 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 IL12BP29460 328 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 LCN1P31025 176 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 MSX2P35548 267 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-201ENST00000261813 KRT20P35900 424 aa10.58□□□□□ -0.72
PFDN1-201ENST00000261813 RFC3P40938 356 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms