RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 WRBO00258 174 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 SH2D1BO14796 132 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 HAT1O14929 419 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 DUSP11O75319 330 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 TRIM3O75382 744 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 WBP4O75554 376 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ERLIN2O94905 339 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 SYNGR4O95473 234 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 IL1BP01584 269 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 IGHG3P01860 377 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 UQCRFS1P1P0C7P4 283 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CLUP10909 449 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 MBL2P11226 248 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 RPA2P15927 270 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 POLR2EP19388 210 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 TNNI3P19429 210 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 U2AF2P26368 475 aaKnown RBP eCLIP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 SPRP35270 261 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 NUP62P37198 522 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ACADSBP45954 432 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CDKN1BP46527 198 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 STARP49675 285 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 AIF1P55008 147 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 VBP1P61758 197 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 RPS4XP62701 263 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 UBE2IP63279 158 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 HSF2Q03933 536 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CUL1Q13616 776 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 COTL1Q14019 142 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 NCF4Q15080 339 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 C17orf58Q2M2W7 97 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 HKDC1Q2TB90 917 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ERICH5Q6P6B1 374 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 RFWD3Q6PCD5 774 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 TMUB2Q71RG4 321 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 EFL1Q7Z2Z2 1120 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 LINC00518Q8N0U6 118 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 SAMD12Q8N8I0 201 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 MINDY2Q8NBR6 621 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 RELL2Q8NC24 303 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 STKLD1Q8NE28 680 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF397Q8NF99 534 aaPredicted RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 BBS1Q8NFJ9 593 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CDC26Q8NHZ8 85 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 RAB3IL1Q8TBN0 382 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 C16orf58Q96GQ5 468 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 IFT74Q96LB3 600 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 PSMB7Q99436 277 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 UBXN6Q9BZV1 441 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CENPHQ9H3R5 247 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 DCTPP1Q9H773 170 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 FN3KRPQ9HA64 309 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 VAT1LQ9HCJ6 419 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CNOT2Q9NZN8 540 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ERVK-18Q9QC07 812 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ATXN10Q9UBB4 475 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 PEF1Q9UBV8 284 aaKnown RBP3.5□□□□□ -1.85
CCDC54-201ENST00000261058 CD300AQ9UGN4 299 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 PLA2G4CQ9UP65 541 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 SLC6A5Q9Y345 797 aa3.5□□□□□ -1.85
CCDC54-201ENST00000261058 ROCK2O75116 1388 aaKnown RBP3.49□□□□□ -1.85
CCDC54-201ENST00000261058 TMEM89A2RUT3 159 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 GSAPA4D1B5 854 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 GOLGA8MH3BSY2 632 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 K7ERQ8 282 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 KLHL2O95198 593 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CAPN1P07384 714 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ASNSP08243 561 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 BCL3P20749 454 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CBX5P45973 191 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 SLC6A8P48029 635 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CEBPDP49716 269 aaPredicted RBP3.49□□□□□ -1.85
CCDC54-201ENST00000261058 TPM4P67936 248 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 GSTO1P78417 241 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CSTF1Q05048 431 aaKnown RBP3.49□□□□□ -1.85
CCDC54-201ENST00000261058 EMC2Q15006 297 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 SSX2Q16385 188 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 KLHL40Q2TBA0 621 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ANKRD55Q3KP44 614 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CCDC153Q494R4 210 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 BCL7AQ4VC05 210 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF506Q5JVG8 444 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 AGAP7PQ5VUJ5 663 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ATL3Q6DD88 541 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 PMF1Q6P1K2 205 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 TMEM53Q6P2H8 277 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 FAM173BQ6P4H8 233 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ASRGL1Q7L266 308 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ADGRD2Q7Z7M1 963 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 YRDCQ86U90 279 aaKnown RBP3.49□□□□□ -1.85
CCDC54-201ENST00000261058 VPS36Q86VN1 386 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 GPR137CQ8N3F9 429 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CERS5Q8N5B7 392 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 BCORP1Q8N888 145 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 NECAB1Q8N987 351 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 OR9A1PQ8NGU1 263 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ENKURQ8TC29 256 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms