RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MEX3DQ86XN8 651 aaKnown RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 POLR1CO15160 346 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 DYRK3O43781 588 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 FADS2O95864 444 aaKnown RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 MT-ND2P03891 347 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 THY1P04216 161 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 IGKV3-11P04433 115 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 MASP1P48740 699 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF136P52737 540 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 CLPPQ16740 277 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 EIPR1Q53HC9 387 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 PLEKHM3Q6ZWE6 761 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 BMPERQ8N8U9 685 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF540Q8NDQ6 660 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 DIO2Q92813 273 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 EFHD2Q96C19 240 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 TGIF2Q9GZN2 237 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 POLE3Q9NRF9 147 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 ENPP5Q9UJA9 477 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 TPRKBQ9Y3C4 175 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 CDHR4A6H8M9 788 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 ARRDC5A6NEK1 342 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 CYP7B1O75881 506 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 FGF5P12034 268 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 PTNP21246 168 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 RORAP35398 523 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 PGBD2Q6P3X8 592 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 AGBL5Q8NDL9 886 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 GAL3ST4Q96RP7 486 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 PHOX2BQ99453 314 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 NRSN2Q9GZP1 204 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 DUSP21Q9H596 190 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 IGLV3-12A0A075B6K2 115 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 CNOT3O75175 753 aaKnown RBP17.45■□□□□ 0.38
TRIM47-201ENST00000254816 WBP4O75554 376 aaKnown RBP17.45■□□□□ 0.38
TRIM47-201ENST00000254816 GP1BAP07359 652 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 INHBBP09529 407 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 CD59P13987 128 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 TRA2AQ13595 282 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIM47-201ENST00000254816 MORN4Q8NDC4 146 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 PLPP5Q8NEB5 264 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 RORBQ92753 470 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 NXF5Q9H1B4 397 aaKnown RBP17.45■□□□□ 0.38
TRIM47-201ENST00000254816 GALNT8Q9NY28 637 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 SCN3BQ9NY72 215 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 HSPE1-MOB4S4R3N1 261 aa17.45■□□□□ 0.38
TRIM47-201ENST00000254816 ZNF318Q5VUA4 2279 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 CDC14CA4D256 554 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 IDSB3KWA1 339 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 E9PQ18 207 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 SOX30O94993 753 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 OXSR1O95747 527 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 HEXBP07686 556 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 IGFBP1P08833 259 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 CLDN6P56747 220 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 TARDBPQ13148 414 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 CTF1Q16619 201 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 FAM69BQ5VUD6 431 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 NKAIN4Q8IVV8 208 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 ENTHD1Q8IYW4 607 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 FAM81AQ8TBF8 368 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 APH1BQ8WW43 257 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 CNOT9Q92600 299 aaKnown RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 SLC46A1Q96NT5 459 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 PCDHGA6Q9Y5G7 932 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 A0A087WUU8 490 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 J3QRK9 145 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 HTR2AP28223 471 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 LSM3P62310 102 aaKnown RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 IL11RAQ14626 422 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 TMEM236Q5W0B7 351 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 FAM199XQ6PEV8 388 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 AHSA2Q719I0 299 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 OVCH1Q7RTY7 1134 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 GDF7Q7Z4P5 450 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 CROCCP3Q8IVE0 287 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 C9orf40Q8IXQ3 194 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 PRR22Q8IZ63 422 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 OR14A16Q8NHC5 309 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 FNDC8Q8TC99 324 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 DAZLQ92904 295 aaKnown RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 ABTB1Q969K4 478 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-201ENST00000254816 SLC41A3Q96GZ6 507 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 HRASLS5Q96KN8 279 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 PITX2Q99697 317 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 G6PC3Q9BUM1 346 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 FLRT3Q9NZU0 649 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 MGAT4BQ9UQ53 548 aa17.44■□□□□ 0.38
TRIM47-201ENST00000254816 HEATR5AQ86XA9 2040 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 MEN1O00255 615 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 SOX14O95416 240 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 HBQ1P09105 142 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 PSMB9P28065 219 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 BMXP51813 675 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 UGT2B15P54855 530 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 ST3GAL3Q11203 375 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 ZER1Q7Z7L7 766 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 ANKRD13BQ86YJ7 626 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 OR4C3Q8NH37 302 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms