RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SERINC4A6NH21 518 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 TMX2-CTNND1H3BSU7 103 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ADAM11O75078 769 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 NTN1O95631 604 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 MMP11P24347 488 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ACAA2P42765 397 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 NR0B1P51843 470 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 UGT2B15P54855 530 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 RAB15P59190 212 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 OR1Q1Q15612 314 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 DCAF12Q5T6F0 453 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PAPD4Q6PIY7 484 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 CD300LDQ6UXZ3 194 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 CPEB2Q7Z5Q1 589 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 NKAIN4Q8IVV8 208 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 C17orf47Q8NEP4 570 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 TOR1AIP2Q8NFQ8 470 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 TSPAN14Q8NG11 270 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 OIT3Q8WWZ8 545 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 SLC35B4Q969S0 331 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 APOL4Q9BPW4 351 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 HOXD1Q9GZZ0 328 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 UBQLN4Q9NRR5 601 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 FLRT3Q9NZU0 649 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ENOPH1Q9UHY7 261 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 MRTO4Q9UKD2 239 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PCDHGA6Q9Y5G7 932 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PMS2P1A4D2B8 440 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 LRP3O75074 770 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 SMNDC1O75940 238 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 LYPD3O95274 346 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 GGT2P36268 569 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 CDH15P55291 814 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ESRRGP62508 458 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 RNF4P78317 190 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 IL5RAQ01344 420 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 C6orf141Q5SZD1 244 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 FAM69BQ5VUD6 431 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PRR22Q8IZ63 422 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 NLGN4XQ8N0W4 816 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 GALNT6Q8NCL4 622 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ACOT11Q8WXI4 607 aaPredicted RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ARSGQ96EG1 525 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 LIN37Q96GY3 246 aaPredicted RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 GPA33Q99795 319 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PRSS27Q9BQR3 290 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 MRPS26Q9BYN8 205 aaKnown RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 GPN3Q9UHW5 284 aaPredicted RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 PCDHGA1Q9Y5H4 931 aa14.01□□□□□ -0.17
HDHD3-201ENST00000238379 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
HDHD3-201ENST00000238379 ABCB7O75027 752 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CSO75390 466 aaKnown RBP14□□□□□ -0.17
HDHD3-201ENST00000238379 KLF7O75840 302 aaPredicted RBP14□□□□□ -0.17
HDHD3-201ENST00000238379 UTS2O95399 124 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CLPTM1O96005 669 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CSTAP01040 98 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 TFAP2AP05549 437 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 OSMP13725 252 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CHMP24386 653 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 LCN1P31025 176 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 ADH7P40394 386 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CRISP1P54107 249 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 CDK5R2Q13319 367 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 PTGES3Q15185 160 aaKnown RBP14□□□□□ -0.17
HDHD3-201ENST00000238379 FNDC7Q5VTL7 733 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF730Q6ZMV8 503 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 PIP4P1Q86T03 277 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 APLFQ8IW19 511 aaPredicted RBP14□□□□□ -0.17
HDHD3-201ENST00000238379 HDAC2Q92769 488 aaKnown RBP14□□□□□ -0.17
HDHD3-201ENST00000238379 UBE2FQ969M7 185 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 C8orf44Q96CB5 159 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 HSPBAP1Q96EW2 488 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 ADOQ96SZ5 270 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 LPAR4Q99677 370 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF559Q9BR84 538 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 NCDNQ9UBB6 729 aa14□□□□□ -0.17
HDHD3-201ENST00000238379 C9J4A7 227 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TSPAN2O60636 221 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 REM1O75628 298 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 STK17BO94768 372 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 MT-CO3P00414 261 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TP53P04637 393 aaPredicted RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 UMODP07911 640 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ATP6V1B1P15313 513 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 TBXA2RP21731 343 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ABCD3P28288 659 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 GTF2A1P52655 376 aaPredicted RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 NUP107P57740 925 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 COX10Q12887 443 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 NCF4Q15080 339 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 NDUFAF6Q330K2 333 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 RBM48Q5RL73 367 aaKnown RBP13.99□□□□□ -0.17
HDHD3-201ENST00000238379 DESI1Q6ICB0 168 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF613Q6PF04 617 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 APOOLQ6UXV4 268 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 HSDL2Q6YN16 418 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 PRICKLE2Q7Z3G6 844 aa13.99□□□□□ -0.17
HDHD3-201ENST00000238379 LSMEM1Q8N8F7 131 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms