RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DCTP40126 519 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 EIF3IQ13347 325 aaKnown RBP12.88□□□□□ -0.35
SIX4-201ENST00000216513 SPRED3Q2MJR0 410 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 TCTN1Q2MV58 587 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 SLC41A3Q96GZ6 507 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 MUS81Q96NY9 551 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 FAM129BQ96TA1 746 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 MED11Q9P086 117 aa12.88□□□□□ -0.35
SIX4-201ENST00000216513 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
SIX4-201ENST00000216513 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 EDN3P14138 238 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 PRKCDQ05655 676 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 CWF19L1Q69YN2 538 aaKnown RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 HS3ST5Q8IZT8 346 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 FAM46AQ96IP4 442 aaKnown RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 NDRG3Q9UGV2 375 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 SLC7A7Q9UM01 511 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 MROH6A6NGR9 719 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 TSPAN4O14817 238 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 SLC22A2O15244 555 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 DOK2O60496 412 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 OR7A10O76100 309 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ST6GAL1P15907 406 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 LHCGRP22888 699 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 CAPZBP47756 277 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 CD97P48960 835 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 METRNLQ641Q3 311 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 PLPP6Q8IY26 295 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ZNF845Q96IR2 970 aaPredicted RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 C1QTNF6Q9BXI9 259 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 NUMA1Q14980 2115 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 PROM1O43490 865 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 PKLRP30613 574 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 CLDN8P56748 225 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 NIPAL3Q6P499 406 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 FAM199XQ6PEV8 388 aaPredicted RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 TEX13CA0A0J9YWL9 993 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 MPPED1O15442 326 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 AGFG2O95081 481 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 HTR3AP46098 478 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 EFNA3P52797 238 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 METAP1P53582 386 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 GARNL3Q5VVW2 1013 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 OR2T33Q8NG76 320 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 OR13C3Q8NGS6 347 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 TIMM8BQ9Y5J9 83 aaPredicted RBP12.87□□□□□ -0.35
SIX4-201ENST00000216513 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 CHRM4P08173 479 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 NR4A2P43354 598 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ST3GAL4Q11206 333 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ALG10Q5BKT4 473 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 STEAP4Q687X5 459 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 FAM111BQ6SJ93 734 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 AAED1Q7RTV5 226 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ULBP2Q9BZM5 246 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 PCED1AQ9H1Q7 454 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
SIX4-201ENST00000216513 ZNF182P17025 639 aaPredicted RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 IMPA1P29218 277 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ECHS1P30084 290 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 RORCP51449 518 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 PDE7AQ13946 482 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 GINS1Q14691 196 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 SLC10A1Q14973 349 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 MYEOVQ96EZ4 313 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 KAT8Q9H7Z6 458 aaKnown RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 USP36Q9P275 1121 aaKnown RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ACOX3O15254 700 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 TIMM8AO60220 97 aaPredicted RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 BCL6P41182 706 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 GABRA2P47869 451 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 GCGRP47871 477 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 PRKXP51817 358 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 RAB2AP61019 212 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 KANK2Q63ZY3 851 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 C18orf63Q68DL7 685 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 DCSTAMPQ9H295 470 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 C12orf4Q9NQ89 552 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 PLA2G3Q9NZ20 509 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
SIX4-201ENST00000216513 BLMHQ13867 455 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 ZNF750Q32MQ0 723 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 BCL7AQ4VC05 210 aa12.86□□□□□ -0.35
SIX4-201ENST00000216513 FAM219BQ5XKK7 198 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms