RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PTBP1P26599 531 aaKnown RBP eCLIP18.75■□□□□ 0.596e-8■■■□□ 17.8
PPP1R3F-201ENST00000055335 BSGP35613 385 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 RFX3P48380 749 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 TGM3Q08188 693 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 ACSM3Q53FZ2 586 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 SLC25A30Q5SVS4 291 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 NUDT13Q86X67 352 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 MEIOBQ8N635 442 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 FGF11Q92914 225 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 ZNF689Q96CS4 500 aaPredicted RBP18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 SGPP1Q9BX95 441 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 HS3ST2Q9Y278 367 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 KNL1Q8NG31 2342 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 ARPC1BO15143 372 aaKnown RBP18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 HOXD4P09016 255 aaPredicted RBP18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 RNF180Q86T96 592 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 ABHD4Q8TB40 342 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 ADAMTS14Q8WXS8 1223 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 THAP4Q8WY91 577 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 AIF1LQ9BQI0 150 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 SGIP1Q9BQI5 828 aa18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
PPP1R3F-201ENST00000055335 TBX6O95947 436 aaPredicted RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 RAB3BP20337 219 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 MAZP56270 477 aaKnown RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 ZP1P60852 638 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 METTL3Q86U44 580 aaKnown RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 ENKD1Q9H0I2 346 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CCDC86Q9H6F5 360 aaKnown RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 MCCC2Q9HCC0 563 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 H3BSH0 61 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 LEFTY2O00292 366 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 KIAA0355O15063 1070 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 F8A1P23610 371 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 HTR1FP30939 366 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 NTSP30990 170 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CLDN12P56749 244 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 KIAA1211LQ6NV74 962 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 C3P1Q6ZMU1 363 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 LHFPL5Q8TAF8 219 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 AMDHD1Q96NU7 426 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 C20orf85Q9H1P6 137 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 MRPS18AQ9NVS2 196 aaKnown RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 KCMF1Q9P0J7 381 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 FBXL4Q9UKA2 621 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 INSL5Q9Y5Q6 135 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 SESN1Q9Y6P5 492 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 UNC80Q8N2C7 3258 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 MEIKINA0A087WXM9 373 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 LRRN3E7EW58 273 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 ARPC5O15511 151 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CLTBP09497 229 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 GDNFP39905 211 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 RIN1Q13671 783 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CD300LDQ6UXZ3 194 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 GET4Q7L5D6 327 aaPredicted RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 OR52N1Q8NH53 320 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 RAD51AP1Q96B01 352 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CPEB1Q9BZB8 566 aaKnown RBP18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 LRRN3Q9H3W5 708 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 CAPN10Q9HC96 672 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 BAIAP2Q9UQB8 552 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 LIPT1Q9Y234 373 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 PPIL1Q9Y3C6 166 aa18.74■□□□□ 0.59
PPP1R3F-201ENST00000055335 SCAMP1O15126 338 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 APOC3P02656 99 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 MMP12P39900 470 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 KHKP50053 298 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 NDC1Q9BTX1 674 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 SLC7A7Q9UM01 511 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 hCG_1807616A0A1W2PRN6 198 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 KHDRBS3O75525 346 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 SIX6O95475 246 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 GLULP15104 373 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 NDUFV2P19404 249 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 IL32P24001 234 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 NOS3P29474 1203 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 THBS2P35442 1172 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 OMPP47874 163 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 PCBP4P57723 403 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 LINC00471Q8N535 108 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 OR2T4Q8NH00 348 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 OR51A7Q8NH64 312 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 SUN3Q8TAQ9 357 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 GHSRQ92847 366 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 TMEM168Q9H0V1 697 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 UBQLN3Q9H347 655 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 XKR8Q9H6D3 395 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 SLC35C2Q9NQQ7 365 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 KLHL28Q9NXS3 571 aa18.73■□□□□ 0.59
PPP1R3F-201ENST00000055335 A0A1B0GVI7 797 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 ATF1P18846 271 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 FUT5Q11128 374 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 STK11Q15831 433 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 TP53I3Q53FA7 332 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 FAM83HQ6ZRV2 1179 aaPredicted RBP18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 CPXM2Q8N436 756 aa18.72■□□□□ 0.59
PPP1R3F-201ENST00000055335 MARVELD3Q96A59 401 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms