RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Med9Q8VCS6 142 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr561Q8VGZ6 314 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tram2Q924Z5 370 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ndufa5Q9CPP6 116 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P2ry12Q9CPV9 347 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 DynapQ9D7M5 161 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 C1qtnf2Q9D8U4 294 aa11.17□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Igkv12-98A0A0G2JGF9 115 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fbxw24E9PXM9 466 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rplp0P14869 317 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cbx3P23198 183 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Epha1Q60750 977 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 BpifcQ8C186 509 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 FgbQ8K0E8 481 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Bcl2l14Q9CPT0 328 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Riok2Q9CQS5 547 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cst11Q9D269 139 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 IghdA0A0A6YW14 291 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm8020F6WLE9 229 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1564K7N6V7 318 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Syt3O35681 587 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Papss2O88428 621 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 ArafP04627 604 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gpr52P0C5J4 361 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ctla2aP12399 137 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lrrn1Q61809 716 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Padi6Q8K3V4 682 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 1700080O16RikQ9D9G4 284 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cyp2j8G3UZ38 503 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1249L7MU51 318 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PtgdsO09114 189 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Arl6O88848 186 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Defb28Q3V2L0 89 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zc3hc1Q80YV2 501 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nudt6Q8CH40 313 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tmem106aQ8VC04 261 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 SharpinQ91WA6 380 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Med11Q9D8C6 117 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cyb5r1Q9DB73 305 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Brca1P48754 1812 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zfp352A2AML7 551 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 BC051665E9Q623 330 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm21800J3QMJ9 180 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cyr61P18406 379 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ubl4aP21126 157 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cdh26P59862 763 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Q3UST5 385 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Taf6Q62311 678 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Orm3Q63805 206 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Med16Q6PGF3 828 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hsh2dQ6VYH9 334 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ccdc116Q80X53 541 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 4933402N03RikQ8CDT9 329 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tmem125Q8CHQ6 216 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1378Q8VGH0 315 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Isoc1Q91V64 297 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ces2cQ91WG0 561 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr114Q923Q8 312 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gmpr2Q99L27 348 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 PtgfrnQ9WV91 879 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Esp18A8R0V1 91 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Itga10E9Q6R1 1167 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 TspearJ3S6Y1 670 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pou3f4P62515 361 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Wdr75Q3U821 830 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc47a2Q3V050 573 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tra2aQ6PFR5 281 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tas2r117Q7M715 330 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nudt15Q8BG93 170 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rxfp3Q8BGE9 472 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Enpp6Q8BGN3 440 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Serpinb1bQ8VHP7 382 aa11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Akap8lQ9R0L7 642 aaKnown RBP11.16□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Myo18aQ9JMH9 2050 aaKnown RBP11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hax1O35387 280 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tuba1bP05213 451 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klk1b8P07628 261 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 LcatP16301 438 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gabarapl2P60521 117 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tuba1aP68369 451 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Wdr20Q3UWE6 569 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olig3Q6PFG8 273 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ube2q1Q7TSS2 422 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ccm2lQ8VCC6 481 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Emid1Q91VF5 444 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc5a2Q923I7 670 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mrpl15Q9CPR5 295 aaKnown RBP11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pole4Q9CQ36 118 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dmrt1Q9QZ59 374 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Spaca6E9Q8Q8 339 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hoxb6P09023 224 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cma1P21844 247 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Actc1P68033 377 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Acta1P68134 377 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 VaspP70460 375 aaKnown RBP11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cnn2Q08093 305 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ttf1Q62187 859 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ablim3Q69ZX8 682 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Arhgef4Q7TNR9 484 aa11.15□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klhl13Q80TF4 654 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms