RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 RngttO55236 597 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fgf1P61148 155 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 St3gal3P97325 374 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fam187bQ0VAY3 358 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nxpe2Q3U095 558 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Dennd1bQ3U1T9 766 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Klhl6Q6V595 619 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pqlc3Q8C6U2 202 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Wfikkn1Q8R0S6 552 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rdh10Q8VCH7 341 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Slc35b3Q922Q5 369 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Emc3Q99KI3 261 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mrps5Q99N87 432 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tspan31Q9CQ88 210 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mrpl19Q9D338 292 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Amdhd1Q9DBA8 426 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 RetnlaQ9EP95 111 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Naa10Q9QY36 235 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm21497A0A087WRK3 222 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Hs3st4D3YVV6 449 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn2r117K7N6V1 857 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cd14P10810 366 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ccr3P51678 359 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Eif1adQ3THJ3 170 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Thoc6Q5U4D9 341 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Eif1aQ60872 144 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rpl35Q6ZWV7 123 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr487Q7TRU9 314 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Zbtb26Q8C8S0 451 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ccdc71Q8VEG0 433 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tex46Q9CPU3 165 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pebp4Q9D9G2 242 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Plxdc2Q9DC11 530 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Trappc4Q9ES56 219 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Bin3Q9JI08 253 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 AU018091E9PWS4 684 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 H2-M11F6U8V3 335 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Apoa2P09813 102 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Hoxd9P28357 339 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 DraxinQ6PAL1 343 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 CenpxQ8C4X1 78 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Zfp709Q8VC29 727 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Wdr74Q8VCG3 384 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr109Q8VG96 314 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr768Q8VGC4 312 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Steap1Q9CWR7 339 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Q9DAR0 182 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rgs17Q9QZB0 210 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ighv6-6A0A075B5T3 119 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ttll3A4Q9E5 927 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ssxa1B1AUS7 101 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm8281L7N235 204 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Khdc4Q3TCX3 612 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tmem231Q3U284 315 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr845Q7TRG2 312 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Dcaf12l2Q8BGW4 469 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Col26a1Q91VF6 440 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Akirin1Q99LF1 191 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pbx4Q99NE9 378 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ephx1Q9D379 455 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nmrk2Q9D7C9 195 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cir1Q9DA19 450 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rtp4Q9ER80 249 aaKnown RBP10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Sgk3Q9ERE3 496 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Syt8Q9R0N6 395 aa10.66□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cd209fD3Z1H5 274 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 RbpjlO08674 515 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Zmat3O54836 290 aaKnown RBP10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fcn1O70165 334 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Bdkrb2P32299 392 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mrpl10Q3TBW2 262 aaKnown RBP10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ubfd1Q78JW9 368 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fbxo5Q7TSG3 421 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Otop1Q80VM9 600 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Npas4Q8BGD7 802 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Kiaa1671Q8BRV5 308 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Leng9Q8BTN6 485 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fbxl3Q8C4V4 428 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pdcd10Q8VE70 212 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rab40bQ8VHP8 278 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Slc25a36Q922G0 311 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Clcc1Q99LI2 539 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Avpr1bQ9WU02 421 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 PcntP48725 2898 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Igkv12-46A0A140T8P6 115 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ajap1A2ALI5 412 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 TmppeD3Z286 447 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn2r110E9PWD5 858 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cox4i1P19783 169 aaKnown RBP10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Atp5j2P56135 88 aaKnown RBP10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gtpbp2Q3UJK4 602 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nt5eQ61503 576 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr1045Q7TR80 315 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Abhd4Q8VD66 342 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr1093Q8VF14 322 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr161Q8VGB9 313 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr525Q8VGL5 309 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Egln3Q91UZ4 239 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 4930402F06RikA2AUQ8 332 aa10.65□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Skint9A7TZG3 319 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms