RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 MC1RQ01726 317 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 KRT32Q14532 448 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 SMC1AQ14683 1233 aaKnown RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 NRF1Q16656 503 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 TMEM183BQ1AE95 376 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 DEFB134Q4QY38 66 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 PRR5LQ6MZQ0 368 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 UNQ9370/PRO34162Q6UXP9 181 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 VRK2Q86Y07 508 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 ZDHHC21Q8IVQ6 265 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 TMEM183AQ8IXX5 376 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 RDH10Q8IZV5 341 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 LINC00518Q8N0U6 118 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 OR5M1Q8NGP8 315 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 SAP25Q8TEE9 199 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 RNF139Q8WU17 664 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 UCMAQ8WVF2 138 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 PRCCQ92733 491 aaPredicted RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 ZNF607Q96SK3 696 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 PKMYT1Q99640 499 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 UVRAGQ9P2Y5 699 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 CHORDC1Q9UHD1 332 aaPredicted RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 MRPS33Q9Y291 106 aaKnown RBP-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 TMEM14AQ9Y6G1 99 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 TTC21BQ7Z4L5 1316 aa-0.72□□□□□ -2.52
LMBR1-222ENST00000638959 MUC21A0A0G2JKD1 596 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 MUC21A0A140T8X8 626 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 GTPBP10A4D1E9 387 aaKnown RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 EI24O14681 340 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SYT7O43581 403 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 KLHL2O95198 593 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CD55P08174 381 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 ABCB1P08183 1280 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CCNA2P20248 432 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 OR3A1P47881 315 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 DHPSP49366 369 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CSE1LP55060 971 aaKnown RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 PLD1Q13393 1074 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 EIF2B1Q14232 305 aaKnown RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SPHARQ15513 63 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CYP51A1Q16850 503 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 RFLNAQ6ZTI6 216 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 ARMCX2Q7L311 632 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 PARGQ86W56 976 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 RALGPS2Q86X27 583 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 FAM219AQ8IW50 185 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SETD6Q8TBK2 473 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SPATA18Q8TC71 538 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 ACER1Q8TDN7 264 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CKAP2Q8WWK9 683 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 LHX4Q969G2 390 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 ASB9Q96DX5 294 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 LINC00615Q96LM1 132 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 GPR137Q96N19 417 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CPXM1Q96SM3 734 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SSX3Q99909 188 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 AGPAT1Q99943 283 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 TMEM121Q9BTD3 319 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 OR11A1Q9GZK7 315 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 SAGE1Q9NXZ1 904 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 TECRQ9NZ01 308 aaKnown RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 ZNF215Q9UL58 517 aaPredicted RBP-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 UGT2A1Q9Y4X1 527 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 PIKFYVEQ9Y2I7 2098 aa-0.73□□□□□ -2.53
LMBR1-222ENST00000638959 CCDC88CQ9P219 2028 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 ESYT2A0FGR8 921 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 GLOD5A6NK44 160 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 IDSB3KWA1 339 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 SUPT3HO75486 399 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 TCF4P15884 667 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 PSMC6P62333 389 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 SLC3A1Q07837 685 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 SYCNQ0VAF6 134 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 PIGHQ14442 188 aaPredicted RBP-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 ATRAIDQ6UW56 229 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 PAQR9Q6ZVX9 377 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 USP50Q70EL3 339 aaPredicted RBP-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 RIMKLAQ8IXN7 391 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 FBXL13Q8NEE6 735 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 DTX3LQ8TDB6 740 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 NDRG1Q92597 394 aaKnown RBP-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 FAM46BQ96A09 425 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 TMEM80Q96HE8 168 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 ZNF558Q96NG5 402 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 SEC62Q99442 399 aaKnown RBP-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 TIMM29Q9BSF4 260 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 LRRC2Q9BYS8 371 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 CHIAQ9BZP6 476 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 SLC40A1Q9NP59 571 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 ZNRD1Q9P1U0 126 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 AASSQ9UDR5 926 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 PFASO15067 1338 aa-0.74□□□□□ -2.53
LMBR1-222ENST00000638959 IGHV3OR16-8A0A075B7F1 116 aa-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 FBLL1A6NHQ2 334 aaKnown RBP-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 UBXN8O00124 270 aa-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 SGK1O00141 431 aa-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 CHRNA1P02708 482 aa-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 ANKRD34CP0C6C1 535 aa-0.75□□□□□ -2.53
LMBR1-222ENST00000638959 CHTF8P0CG12 524 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms