RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FAM83FQ8NEG4 500 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-213ENST00000638680 DNAJB6O75190 326 aa17.44■□□□□ 0.38
SCARB2-213ENST00000638680 CRTAPO75718 401 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-213ENST00000638680 BEST4Q8NFU0 473 aa17.44■□□□□ 0.38
SCARB2-213ENST00000638680 NOX3Q9HBY0 568 aa17.44■□□□□ 0.38
SCARB2-213ENST00000638680 GPR34Q9UPC5 381 aa17.44■□□□□ 0.38
SCARB2-213ENST00000638680 CASC3O15234 703 aaKnown RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 TMEM225BP0DP42 221 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ARSAP15289 507 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 FXYD4P59646 89 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 PODNL1Q6PEZ8 512 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 TMEM163Q8TC26 289 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 SYT3Q9BQG1 590 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 NPIPA5A0A0B4J1W7 369 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ZNF736B4DX44 427 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 NPIPA7E9PJI5 369 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 NPIPA8P0DM63 369 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ALDH3B1P43353 468 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 LILRA2Q8N149 483 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ZNF417Q8TAU3 575 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 BRIX1Q8TDN6 353 aaKnown RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 GPR148Q8TDV2 347 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 MLLT11Q13015 90 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 NADSYN1Q6IA69 706 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 Q6ZPB1 254 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 TMEM25Q86YD3 366 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 GABRQQ9UN88 632 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 BMP4P12644 408 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 FASLGP48023 281 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 DLX2Q07687 328 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 GRM7Q14831 915 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 FAM69BQ5VUD6 431 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ARHGAP12Q8IWW6 846 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 ATOH8Q96SQ7 321 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 AP1M2Q9Y6Q5 423 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 MSL3P1P0C860 447 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 AKR1C2P52895 323 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 TMEM102Q8N9M5 508 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 TMEM68Q96MH6 324 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 SERINC2Q96SA4 455 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 NAA11Q9BSU3 229 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-213ENST00000638680 SLC6A5Q9Y345 797 aa17.43■□□□□ 0.38
SCARB2-213ENST00000638680 MEGF11A6BM72 1044 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 PRAMEF2O60811 474 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 ZNF888P0CJ79 500 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-213ENST00000638680 MRPL49Q13405 166 aaKnown RBP17.42■□□□□ 0.38
SCARB2-213ENST00000638680 WDR45BQ5MNZ6 344 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 PGM2L1Q6PCE3 622 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 IL20RBQ6UXL0 311 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 SPRED1Q7Z699 444 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 CBARPQ8N350 705 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-213ENST00000638680 SFXN5Q8TD22 340 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 TOMM40LQ969M1 308 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 DDIT4LQ96D03 193 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 GMLQ99445 158 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 ST6GALNAC5Q9BVH7 336 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 PPA2Q9H2U2 334 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 NUP188Q5SRE5 1749 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 M0QZQ0 153 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 BRINP1O60477 761 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 FUT1P19526 365 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 BDKRB2P30411 391 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 PTGER1P34995 402 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 CAV3P56539 151 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 ZC3H14Q6PJT7 736 aaKnown RBP17.42■□□□□ 0.38
SCARB2-213ENST00000638680 C3orf58Q8NDZ4 430 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 BMFQ96LC9 184 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 KCMF1Q9P0J7 381 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 GMPR2Q9P2T1 348 aaKnown RBP17.42■□□□□ 0.38
SCARB2-213ENST00000638680 ANTXRLA6NF34 631 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 MROH6A6NGR9 719 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 HTR3BO95264 441 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 IL1AP01583 271 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 CAV2P51636 162 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 CTSL3PQ5NE16 218 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 GON7Q9BXV9 100 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 NENFQ9UMX5 172 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 MPIG6BO95866 241 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 GYPBP06028 91 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 LIPCP11150 499 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 MBTPS1Q14703 1052 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 LILRB2Q8N423 598 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 RNF175Q8N4F7 328 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 NPRL2Q8WTW4 380 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 SLC6A16Q9GZN6 736 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 HOXD1Q9GZZ0 328 aa17.42■□□□□ 0.38
SCARB2-213ENST00000638680 HMGN2P05204 90 aaKnown RBP17.41■□□□□ 0.38
SCARB2-213ENST00000638680 TAS2R31P59538 309 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 MALLQ13021 153 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 CST6Q15828 149 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 LCTLQ6UWM7 567 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 EDN1P05305 212 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 THEGLP0DJG4 465 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 GABRB3P28472 473 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 AHRP35869 848 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 FGL2Q14314 439 aa17.41■□□□□ 0.38
SCARB2-213ENST00000638680 NRARPQ7Z6K4 114 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms