RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FRG2Q64ET8 278 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 C3orf33Q6P1S2 294 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TRIM40Q6P9F5 258 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TRMT10AQ8TBZ6 339 aaKnown RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 PHOSPHO1Q8TCT1 267 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 HASPINQ8TF76 798 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 FRG2BQ96QU4 278 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ADGRE3Q9BY15 652 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 BHLHE41Q9C0J9 482 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ALX4Q9H161 411 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 PRMT8Q9NR22 394 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 CTPS2Q9NRF8 586 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 RASD1Q9Y272 281 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 C2orf92A0A1B0GVN3 265 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 CD8B2A6NJW9 211 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TRBC1P01850 177 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 IGHA1P01876 353 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ARAFP10398 606 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 CD8BP10966 210 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 CELP19835 753 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 DRD5P21918 477 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 VIPR1P32241 457 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 SOX18P35713 384 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 GDF5P43026 501 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 AP3S2P59780 193 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 IL10RAQ13651 578 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TRAM1Q15629 374 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 OLFML2AQ68BL7 652 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 SCD5Q86SK9 330 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 SLC9B2Q86UD5 537 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 MISPQ8IVT2 679 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 HJURPQ8NCD3 748 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 THAP6Q8TBB0 222 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 C2CD4CQ8TF44 421 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 THEM6Q8WUY1 208 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 RAB7BQ96AH8 199 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF649Q9BS31 505 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 C16orf70Q9BSU1 422 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TM6SF2Q9BZW4 377 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ELAC1Q9H777 363 aaKnown RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 GPATCH2Q9NW75 528 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 PCDHB9Q9Y5E1 797 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 NPFFR2Q9Y5X5 522 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 PTPRDP23468 1912 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 CHD5Q8TDI0 1954 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 CCDC88CQ9P219 2028 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 A0A0G2JK05 382 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 C17orf113A0A1B0GUU1 675 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 LOC390937A0A1W2PQ73 354 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 MCIDASD6RGH6 385 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 INSIG1O15503 277 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 IGFBP1P08833 259 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-221ENST00000638141 ZDHHC11BP0C7U3 371 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 OR12D1P0DN82 309 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 GKP32189 559 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 GIPRP48546 466 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 TBX4P57082 545 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 CDK6Q00534 326 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 SIGLEC14Q08ET2 396 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 MANEAQ5SRI9 462 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 GPRC6AQ5T6X5 926 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 HDDC3Q8N4P3 179 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 ZFP41Q8N8Y5 198 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 WDSUB1Q8N9V3 476 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 NFKBIDQ8NI38 313 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 R3HDMLQ9H3Y0 253 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 GULP1Q9UBP9 304 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 PTGESO14684 152 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 OR10H3O60404 316 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 CR2P20023 1033 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 FPR3P25089 353 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 MAPK9P45984 424 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 TAF1CQ15572 869 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-221ENST00000638141 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 SMARCD3Q6STE5 483 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 EDEM2Q9BV94 578 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 CIPCQ9C0C6 399 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 PIN4Q9Y237 131 aaKnown RBP11.25□□□□□ -0.61
CAPN3-221ENST00000638141 EXOGQ9Y2C4 368 aaKnown RBP11.25□□□□□ -0.61
CAPN3-221ENST00000638141 THSD7BQ9C0I4 1608 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 HTTP42858 3142 aa11.25□□□□□ -0.61
CAPN3-221ENST00000638141 PLXNA3P51805 1871 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 A0A0D9SG52 128 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 FAM227AF5H4B4 570 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 H3BRB1 525 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 TNFRSF10BO14763 440 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 RNF13O43567 381 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 H1F0P07305 194 aaKnown RBP11.24□□□□□ -0.61
CAPN3-221ENST00000638141 ETFAP13804 333 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 GDNFP39905 211 aa11.24□□□□□ -0.61
CAPN3-221ENST00000638141 CRATP43155 626 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms