RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SNTG1Q9NSN8 517 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 EVA1BQ9NVM1 165 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 GPR52Q9Y2T5 361 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 PRUNE2Q8WUY3 3088 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 COL4A2P08572 1712 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 OR10H2O60403 315 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 BRINP1O60477 761 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.61
CLN8-212ENST00000637083 NKX2-2O95096 273 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 CDRT1O95170 752 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 DLGAP3O95886 979 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 THY1P04216 161 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 PAICSP22234 425 aaKnown RBP11.27□□□□□ -0.61
CLN8-212ENST00000637083 TNFSF8P32971 234 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SLC1A3P43003 542 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 GCGRP47871 477 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 LSSP48449 732 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SLC9A3P48764 834 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 HOXC5Q00444 222 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 ID2Q02363 134 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
CLN8-212ENST00000637083 ZNF613Q6PF04 617 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SLC22A18ASQ8N1D0 253 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SLC43A2Q8N370 569 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 OR4Q3Q8NH05 313 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 GATAD2BQ8WXI9 593 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 CTHRC1Q96CG8 243 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 KLHDC7BQ96G42 594 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 POMT2Q9UKY4 750 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 MRPS2Q9Y399 296 aaKnown RBP11.27□□□□□ -0.61
CLN8-212ENST00000637083 CMAHPQ9Y471 501 aa11.27□□□□□ -0.61
CLN8-212ENST00000637083 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.61
CLN8-212ENST00000637083 CTDSP2O14595 271 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 DNAJB6O75190 326 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 GAAP10253 952 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 FGF9P31371 208 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 GABRA3P34903 492 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 MAP3K8P41279 467 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 SEPHS1P49903 392 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 ZNF155Q12901 538 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 CCNJQ5T5M9 372 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 CXXC5Q7LFL8 322 aaKnown RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 GALNT12Q8IXK2 581 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 ZDHHC1Q8WTX9 485 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 SLC35B4Q969S0 331 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 TOE1Q96GM8 510 aaKnown RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 SAMD8Q96LT4 415 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 PRSS27Q9BQR3 290 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 SIDT1Q9NXL6 827 aaKnown RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 TNFRSF10DQ9UBN6 386 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 BAIAP2Q9UQB8 552 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 CARD8Q9Y2G2 431 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 MED31Q9Y3C7 131 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 TRDV1A0A1B0GX56 115 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 CH25HO95992 272 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 IGHA1P01876 353 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 HLA-DPB1P04440 258 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 LIMS3P0CW19 117 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 LIMS4P0CW20 117 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 IFI30P13284 250 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 GTF2E2P29084 291 aaKnown RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 BMP8BP34820 402 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 SOX18P35713 384 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 CAPZA2P47755 286 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 PSPHP78330 225 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 MGAT2Q10469 447 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 DOC2BQ14184 412 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 FZD2Q14332 565 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 AMZ1Q400G9 498 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 CRTC2Q53ET0 693 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 QSOX2Q6ZRP7 698 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 TMPRSS11FQ6ZWK6 438 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 C11orf74Q86VG3 221 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 PARGQ86W56 976 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 CADM3Q8N126 398 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 RNF217Q8TC41 542 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 FANK1Q8TC84 345 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 HOXB13Q92826 284 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 OR52D1Q9H346 318 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 UBQLN3Q9H347 655 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 POLE4Q9NR33 117 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 GPR27Q9NS67 375 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 QPCTLQ9NXS2 382 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms