RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 PCDHGB4Q9UN71 923 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 SNX8Q9Y5X2 465 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 ROS1P08922 2347 aa11.27□□□□□ -0.6
LINC00963-217ENST00000624009 F8P00451 2351 aa11.27□□□□□ -0.6
LINC00963-217ENST00000624009 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.6
LINC00963-217ENST00000624009 CELSR1Q9NYQ6 3014 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 SYT5O00445 386 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 SDHDO14521 159 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 HCRTR2O43614 444 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 NDUFB5O43674 189 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 SCO2O43819 266 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 OXSR1O95747 527 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 CRHP06850 196 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 HPGDP15428 266 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 OPRM1P35372 400 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 MAGEA8P43361 318 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 PCYT1AP49585 367 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 WNT3P56703 355 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 CLDN18P56856 261 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 B3GALT5-AS1P59052 145 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 TP53BP2Q13625 1128 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 DCST1Q5T197 706 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 ZNF527Q8NB42 609 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 PIWIL2Q8TC59 973 aaKnown RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 ADAMTS15Q8TE58 950 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 NMUR2Q9GZQ4 415 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 DSN1Q9H410 356 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 PNPOQ9NVS9 261 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 AIG1Q9NVV5 245 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 ARGLU1Q9NWB6 273 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.61
LINC00963-217ENST00000624009 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-217ENST00000624009 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 E9PBE3 544 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 H0Y3Z8 333 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 SCDO00767 359 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CFLARO15519 480 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 RCBTB2O95199 551 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 PRF1P14222 555 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 IDO1P14902 403 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 HK1P19367 917 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CAPN3P20807 821 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 EFNA1P20827 205 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-217ENST00000624009 ATP6V1C1P21283 382 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 UQCRC2P22695 453 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CTSSP25774 331 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 ASCL1P50553 236 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 SUMO3P55854 103 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-217ENST00000624009 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 PGS1Q32NB8 556 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 DCST2Q5T1A1 773 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 OR4F3Q6IEY1 312 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 POMZP3Q6PJE2 187 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 APOOLQ6UXV4 268 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 MEX3BQ6ZN04 569 aaKnown RBP11.26□□□□□ -0.61
LINC00963-217ENST00000624009 GTPBP8Q8N3Z3 284 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-217ENST00000624009 JADE3Q92613 823 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 ZBTB8AQ96BR9 441 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 C7orf26Q96N11 449 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CCDC115Q96NT0 180 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 RTN4RQ9BZR6 473 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 POLE3Q9NRF9 147 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 FLRT3Q9NZU0 649 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 JKAMPQ9P055 326 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 MED11Q9P086 117 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
LINC00963-217ENST00000624009 MTORP42345 2549 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 OR2M5A3KFT3 312 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 FAM90A27PA6NNH2 459 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 H3BNH8 94 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 TNFRSF21O75509 655 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 TGDSO95455 350 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 ALDOCP09972 364 aaKnown RBP11.25□□□□□ -0.61
LINC00963-217ENST00000624009 ADH6P28332 368 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 EIF1P41567 113 aaKnown RBP11.25□□□□□ -0.61
LINC00963-217ENST00000624009 RFX3P48380 749 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 MRPL19P49406 292 aaKnown RBP11.25□□□□□ -0.61
LINC00963-217ENST00000624009 ZNF136P52737 540 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 ATP12AP54707 1039 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 IRX1P78414 480 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-217ENST00000624009 GSTA3Q16772 222 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 KLHL26Q53HC5 615 aa11.25□□□□□ -0.61
LINC00963-217ENST00000624009 RAET1LQ5VY80 246 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms