RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EFCAB7A8K855 629 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 C17orf105B2RV13 164 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 SYPP08247 313 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 ACVR2AP27037 513 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 ADH7P40394 386 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 PPICP45877 212 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 BTG2P78543 158 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 BNC1Q01954 994 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 CFHR1Q03591 330 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 FGFBP1Q14512 234 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 SMN1Q16637 294 aaKnown RBP15.15■□□□□ 0.02
LDB3-208ENST00000623007 HLA-BQ31612 363 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 MFSD4BQ5TF39 518 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 RHBDD2Q6NTF9 364 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 OLIG3Q7RTU3 272 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 CCDC103Q8IW40 242 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 C16orf52Q8NHV5 167 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 RFKQ969G6 155 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 YIPF2Q9BWQ6 316 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 SLC7A5P2Q9GIP4 190 aa15.15■□□□□ 0.02
LDB3-208ENST00000623007 TCRBV16S1A1N1A0A5B0 115 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 CHP2O43745 196 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 TPST2O60704 377 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 CDC123O75794 336 aaPredicted RBP15.14■□□□□ 0.01
LDB3-208ENST00000623007 MAOAP21397 527 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 SSTR4P31391 388 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 CSTF1Q05048 431 aaKnown RBP15.14■□□□□ 0.01
LDB3-208ENST00000623007 GINS1Q14691 196 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 OR1Q1Q15612 314 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 KLHL22Q53GT1 634 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 ARHGAP40Q5TG30 622 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 PLAG1Q6DJT9 500 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 TSSK4Q6SA08 328 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 Q6ZPB1 254 aaPredicted RBP15.14■□□□□ 0.01
LDB3-208ENST00000623007 ZNF367Q7RTV3 350 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 SIMC1Q8NDZ2 872 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 PIGKQ92643 395 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 FUNDC2Q9BWH2 189 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 SLC7A7Q9UM01 511 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 NUP210LQ5VU65 1888 aa15.14■□□□□ 0.01
LDB3-208ENST00000623007 GXYLT2A0PJZ3 443 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 NPIPB9F8W1W9 429 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 TGFBR3LH3BV60 316 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 GABARAPO95166 117 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 RCBTB2O95199 551 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 FADS2O95864 444 aaKnown RBP15.13■□□□□ 0.01
LDB3-208ENST00000623007 TP53P04637 393 aaPredicted RBP15.13■□□□□ 0.01
LDB3-208ENST00000623007 CT45A8P0DMV1 189 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 CT45A9P0DMV2 189 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 FOLR1P15328 257 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 SLC15A1P46059 708 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 PGDP52209 483 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 GP2P55259 537 aaKnown RBP15.13■□□□□ 0.01
LDB3-208ENST00000623007 ST3GAL4Q11206 333 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 KCNAB1Q14722 419 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 MAPK14Q16539 360 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 SYT16Q17RD7 645 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 TIMM50Q3ZCQ8 353 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 CT45A2Q5DJT8 189 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 LAIR1Q6GTX8 287 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 CCDC81Q6ZN84 652 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 DGAT2L6Q6ZPD8 337 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 P2RY8Q86VZ1 359 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 TMEM151BQ8IW70 566 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 RCBTB1Q8NDN9 531 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 PLPP5Q8NEB5 264 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 OR52L1Q8NGH7 329 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 TMEM239Q8WW34 195 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 UBE2FQ969M7 185 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 SENP5Q96HI0 755 aaPredicted RBP15.13■□□□□ 0.01
LDB3-208ENST00000623007 C11orf16Q9NQ32 467 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 COPS7AQ9UBW8 275 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.13■□□□□ 0.01
LDB3-208ENST00000623007 BAIAP2Q9UQB8 552 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 MED31Q9Y3C7 131 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 CDH10Q9Y6N8 788 aa15.13■□□□□ 0.01
LDB3-208ENST00000623007 FRG2CA6NGY1 282 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PEX12O00623 359 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 KLF4O43474 513 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 INMTO95050 263 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 SOX14O95416 240 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 BCL10O95999 233 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PSMB9P28065 219 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 CTBP2P56545 445 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PRKCDQ05655 676 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TRA2AQ13595 282 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDB3-208ENST00000623007 SNAP47Q5SQN1 464 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 ULK3Q6PHR2 472 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 PRICKLE2Q7Z3G6 844 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 ARHGAP22Q7Z5H3 698 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 C17orf47Q8NEP4 570 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 BRIX1Q8TDN6 353 aaKnown RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 DNAJA4Q8WW22 397 aaPredicted RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 UBQLN4Q9NRR5 601 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 SLC6A14Q9UN76 642 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
LDB3-208ENST00000623007 EYSQ5T1H1 3165 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 FRS3O43559 492 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 HPGDP15428 266 aa15.12■□□□□ 0.01
LDB3-208ENST00000623007 BMP7P18075 431 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms