RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 NMNAT1Q9HAN9 279 aaPredicted RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 RXFP3Q9NSD7 469 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 C2orf42Q9NWW7 574 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 VNN3Q9NY84 501 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 NXT1Q9UKK6 140 aaKnown RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 BOKQ9UMX3 212 aaPredicted RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 SLC35A3Q9Y2D2 325 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 PLEKHA6Q9Y2H5 1048 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 IER3IP1Q9Y5U9 82 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CROCCQ5TZA2 2017 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 TRBV2A0A0J9YWF9 115 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 A0A1B0GX78 115 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 VNN2O95498 520 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CEACAM5P06731 702 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CD1CP29017 333 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SNU13P55769 128 aaKnown RBP8.66□□□□□ -1.02
GGA3-223ENST00000621870 SPEM2Q0P670 501 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CPZQ66K79 652 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 USP43Q70EL4 1123 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 GRAMD2AQ8IUY3 354 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SIRT6Q8N6T7 355 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 PSD4Q8NDX1 1056 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 FRS2Q8WU20 508 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 CAPSLQ8WWF8 208 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SGCDQ92629 289 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 RDH12Q96NR8 316 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 BTBD2Q9BX70 525 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 IRF2BPLQ9H1B7 796 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 P2RY12Q9H244 342 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 SMOXQ9NWM0 555 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 ALPK2Q86TB3 2170 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 NOTCH2Q04721 2471 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 DOCK2Q92608 1830 aa8.66□□□□□ -1.02
GGA3-223ENST00000621870 FLRT2O43155 660 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ENTPD6O75354 484 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 GATBO75879 557 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 RETP07949 1114 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 PNMTP11086 282 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 PCGF2P35227 344 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 MTNR1AP48039 350 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 RIDAP52758 137 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 TGFBR3Q03167 851 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 DMPKQ09013 629 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 HLA-BQ31612 363 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 UNQ6126/PRO20091Q6UXV3 157 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CCDC80Q76M96 950 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 TECPR1Q7Z6L1 1165 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 RPS19BP1Q86WX3 136 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 TIGD4Q8IY51 512 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 LSMEM2Q8N112 164 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 OR14A16Q8NHC5 309 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ZFAND2BQ8WV99 257 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 TESCQ96BS2 214 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ZMYND19Q96E35 227 aaPredicted RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 CST11Q9H112 138 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 OR10A5Q9H207 317 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 OR51B6Q9H340 312 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CLMPQ9H6B4 373 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 SLC7A11Q9UPY5 501 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 PCDHGB2Q9Y5G2 931 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 COL4A1P02462 1669 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 IDSB3KWA1 339 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 LMO7DNF2Z398 122 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 F5H5K5 113 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ARNTLO00327 626 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 TAPBPO15533 448 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 PLRG1O43660 514 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 OXSR1O95747 527 aaPredicted RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 LCATP04180 440 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 MTHFD2P13995 350 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 MPLP40238 635 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 TAS2R43P59537 309 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 REEP5Q00765 189 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CBLBQ13191 982 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 SCGB2B2Q4G0G5 96 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 MRPL2Q5T653 305 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 FIP1L1Q6UN15 594 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 KLBQ86Z14 1044 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 MMP21Q8N119 569 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 OR2I1PQ8NGU4 316 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ZFPM2Q8WW38 1151 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 GINS4Q9BRT9 223 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CDH20Q9HBT6 801 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 GPN1Q9HCN4 374 aaPredicted RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 ARMC1Q9NVT9 282 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 GLS2Q9UI32 602 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 ADAM29Q9UKF5 820 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 CAMK2AQ9UQM7 478 aa8.65□□□□□ -1.02
GGA3-223ENST00000621870 EXOSC1Q9Y3B2 195 aaKnown RBP8.65□□□□□ -1.02
GGA3-223ENST00000621870 PRAMEF33A0A0G2JMD5 474 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 SPTY2D1-AS1A0A0U1RR47 76 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 PSMD7P51665 324 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 DCAF7P61962 342 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 ERVK-25P63136 954 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 SPHARQ15513 63 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 ZNF791Q3KP31 576 aaPredicted RBP8.65□□□□□ -1.03
GGA3-223ENST00000621870 SPIN3Q5JUX0 258 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms