RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 OR10A4Q9H209 315 aa7.87□□□□□ -1.15
ALMS1-208ENST00000620466 FOLH1BQ9HBA9 442 aa7.87□□□□□ -1.15
ALMS1-208ENST00000620466 PDFQ9HBH1 243 aa7.87□□□□□ -1.15
ALMS1-208ENST00000620466 THSD1Q9NS62 852 aa7.87□□□□□ -1.15
ALMS1-208ENST00000620466 APOBEC3BQ9UH17 382 aaKnown RBP7.87□□□□□ -1.15
ALMS1-208ENST00000620466 ATXN7L1Q9ULK2 861 aaPredicted RBP7.87□□□□□ -1.15
ALMS1-208ENST00000620466 ARHGAP33O14559 1287 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 EPCAMP16422 314 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 PSMB5P28074 263 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 E2F1Q01094 437 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RAB40BQ12829 278 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CST6Q15828 149 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ANKRD54Q6NXT1 300 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 LIX1LQ8IVB5 337 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RIMKLAQ8IXN7 391 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CENPOQ9BU64 300 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 DEFB126Q9BYW3 111 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 AMBRA1Q9C0C7 1298 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MGAT4CQ9UBM8 478 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SH2B3Q9UQQ2 575 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MEIOCA2RUB1 952 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 OR2A25A4D2G3 310 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 TRAPPC13A5PLN9 417 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 FAM155AB1AL88 458 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CTDSP2O14595 271 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 NCR1O76036 304 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 TOXO94900 526 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ZNF888P0CJ79 500 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ARAFP10398 606 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 GPR143P51810 404 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MLLT11Q13015 90 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MLC1Q15049 377 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 NNATQ16517 81 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ZNF542PQ5EBM4 170 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CPOQ8IVL8 374 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SGTBQ96EQ0 304 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RADILQ96JH8 1075 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 HRASLS5Q96KN8 279 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SLC46A2Q9BY10 475 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RABL2AQ9UBK7 228 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 HMX3A6NHT5 357 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 H0YIV9 168 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SDC3O75056 442 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CSTAP01040 98 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 GSTT2P0CG29 244 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 DNASE1P24855 282 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 PITPNBP48739 271 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RPS15P62841 145 aaKnown RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 STEAP3Q658P3 488 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 FRMPD2BQ6IN97 320 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 TTLL10Q6ZVT0 673 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ZER1Q7Z7L7 766 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SYNPOQ8N3V7 929 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CSNK1A1LQ8N752 337 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SMARCD2Q92925 531 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MS4A4EQ96PG1 132 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 NIPSNAP1Q9BPW8 284 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 KATNBL1Q9H079 304 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RXFP3Q9NSD7 469 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 A0A1W2PQ09 198 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ACOT7O00154 380 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 FOXE1O00358 373 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 P04436 131 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 GTF2F2P13984 249 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ITGB7P26010 798 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CST5P28325 142 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ERP29P30040 261 aaKnown RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 LBX1P52954 281 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 GP2P55259 537 aaKnown RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 PFN3P60673 137 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 GRK1Q15835 563 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SYPL1Q16563 259 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SFRP4Q6FHJ7 346 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 PHC2Q8IXK0 858 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 OR4K13Q8NH42 304 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MSANTD3Q96H12 275 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MROQ9BYG7 248 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 LTB4R2Q9NPC1 389 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CUEDC1Q9NWM3 386 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CACNG2Q9Y698 323 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 hCG_1807616A0A1W2PRN6 198 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ANKRD28O15084 1053 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CASC3O15234 703 aaKnown RBP7.86□□□□□ -1.15
ALMS1-208ENST00000620466 PEX14O75381 377 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 IMPA1P29218 277 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 HOXC5Q00444 222 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 RHEBQ15382 184 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 AGAP6Q5VW22 663 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ANKRD34AQ69YU3 496 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 SLC46A3Q7Z3Q1 461 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 VRK2Q86Y07 508 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 CASTOR1Q8WTX7 329 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 MYEOVQ96EZ4 313 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 AGAP4Q96P64 663 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 ACTR6Q9GZN1 396 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 EGLN3Q9H6Z9 239 aa7.86□□□□□ -1.15
ALMS1-208ENST00000620466 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms