RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 EPPINO95925 133 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 AVPP01185 164 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 NPIPA8P0DM63 369 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 RAP2AP10114 183 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 NID1P14543 1247 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ENDOUP21128 410 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 PSMA4P25789 261 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ITGA3P26006 1051 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ADH7P40394 386 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 TMED10P49755 219 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SSR4P51571 173 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 FBXW4P57775 412 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 EEF1A1P68104 462 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 CDC20Q12834 499 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 NTRK2Q16620 822 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 GRAMD1BQ3KR37 738 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 GLIPR1L2Q4G1C9 344 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 IFI44LQ53G44 452 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 PDZK1Q5T2W1 519 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 B3GNTL1Q67FW5 361 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 DESI1Q6ICB0 168 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 APOOLQ6UXV4 268 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 VTCN1Q7Z7D3 282 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 HMGN2P46Q86SG4 172 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SPACA3Q8IXA5 215 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 CMIPQ8IY22 773 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 DND1Q8IYX4 353 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 CLIP4Q8N3C7 705 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 GALNT16Q8N428 558 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 TMEM156Q8N614 296 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SIRT6Q8N6T7 355 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 FAM86B1Q8N7N1 296 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 APOBEC4Q8WW27 367 aaKnown RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 PYDC1Q8WXC3 89 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ASB15Q8WXK1 588 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 PROX1Q92786 737 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 STMN2Q93045 179 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 HGDQ93099 445 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 TMCO6Q96DC7 493 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SPACA9Q96E40 222 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 HSH2DQ96JZ2 352 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 C7orf34Q96L11 122 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SGCZQ96LD1 299 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SEPHS2Q99611 448 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ARMC7Q9H6L4 198 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 DCLRE1BQ9H816 532 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 YY1AP1Q9H869 796 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 EVA1AQ9H8M9 152 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 IL1RAPQ9NPH3 570 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 FLRT3Q9NZU0 649 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 TEKT2Q9UIF3 430 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 AURKCQ9UQB9 309 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF443Q9Y2A4 671 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-209ENST00000620393 SH3GLB1Q9Y371 365 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 CHST2Q9Y4C5 530 aa7.37□□□□□ -1.23
CPNE3-209ENST00000620393 DCHS1Q96JQ0 3298 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CCDC88CQ9P219 2028 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 A0A1W2PQD3 144 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CDHR4A6H8M9 788 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 PRAMEF25A6NGN4 478 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CLDN24A6NM45 220 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ALG1L2C9J202 215 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 H3BNH8 94 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SCDO00767 359 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 TP53I11O14683 189 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 HNRNPRO43390 633 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ICOSLGO75144 302 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 KRT36O76013 467 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 OR6B1O95007 311 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 OXSR1O95747 527 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SEMG1P04279 462 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 HPGDP15428 266 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SOX3P41225 446 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 OR1E2P47887 323 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CLK3P49761 638 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 HLCSP50747 726 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CCL11P51671 97 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 FGFBP1Q14512 234 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 DEFB109BQ30KR1 87 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 IQCCQ4KMZ1 466 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 LIN52Q52LA3 116 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ABHD17BQ5VST6 288 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 RNF220Q5VTB9 566 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 IL20RBQ6UXL0 311 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CCDC81Q6ZN84 652 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF836Q6ZNA1 936 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 PIWIL3Q7Z3Z3 882 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 TSEN54Q7Z6J9 526 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 COMTD1Q86VU5 262 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 CARM1Q86X55 608 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 GRAMD2AQ8IUY3 354 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 APLFQ8IW19 511 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 GPALPP1Q8IXQ4 340 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF527Q8NB42 609 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 POGLUT1Q8NBL1 392 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 RNF138Q8WVD3 245 aa7.36□□□□□ -1.23
CPNE3-209ENST00000620393 GEMIN6Q8WXD5 167 aaKnown RBP7.36□□□□□ -1.23
CPNE3-209ENST00000620393 SLC35B4Q969S0 331 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms