RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 OR7E24Q6IFN5 339 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 OR4N5Q8IXE1 308 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 SNX31Q8N9S9 440 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 OR52R1Q8NGF1 315 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 RHEBL1Q8TAI7 183 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 FAM110BQ8TC76 370 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 MAGEE2Q8TD90 523 aaPredicted RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 MUCL1Q96DR8 90 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 UBXN10Q96LJ8 280 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 KLHL15Q96M94 604 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 MUS81Q96NY9 551 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 KATNB1Q9BVA0 655 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 BRINP2Q9C0B6 783 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 DSN1Q9H410 356 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 RHOJQ9H4E5 214 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 ZNF442Q9H7R0 627 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 FOLH1BQ9HBA9 442 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 TANC2Q9HCD6 1990 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 A0A1B0GUS0 222 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 ALG1L2C9J202 215 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 PDLIM1O00151 329 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 CLOCKO15516 846 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 DNAJA2O60884 412 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 KERAO60938 352 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 SNUPNO95149 360 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 PLGP00747 810 aaPredicted RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 COL6A2P12110 1019 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 GGT1P19440 569 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 MAP3K8P41279 467 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 XKP51811 444 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 SLC16A1P53985 500 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 DEFA6Q01524 100 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 TSNQ15631 228 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 LARP4Q71RC2 724 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNCA-213ENST00000618500 ZNF786Q8N393 782 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 INPP5KQ9BT40 448 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 FAIM2Q9BWQ8 316 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 G6PC2Q9NQR9 355 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 SMYD2Q9NRG4 433 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 NTMQ9P121 344 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 KLHL9Q9P2J3 617 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 ING1Q9UK53 422 aaPredicted RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 PSME2Q9UL46 239 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 GRID1Q9ULK0 1009 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 USP22Q9UPT9 525 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 GRIP1Q9Y3R0 1128 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 ABCD4O14678 606 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 ICMTO60725 284 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 GUSBP08236 651 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 CREB1P16220 341 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 FNTAP49354 379 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 IDH3GP51553 393 aaPredicted RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 SNRPD2P62316 118 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 UBA52P62987 128 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 HBMQ6B0K9 141 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 MFSD12Q6NUT3 480 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 TMEM64Q6YI46 380 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 DOK3Q7L591 496 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 PRR22Q8IZ63 422 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 UHMK1Q8TAS1 419 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 GRK7Q8WTQ7 553 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 GCDHQ92947 438 aaPredicted RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 MRPL24Q96A35 216 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 MRRFQ96E11 262 aaKnown RBP4.02□□□□□ -1.77
SNCA-213ENST00000618500 LACRTQ9GZZ8 138 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 MANSC1Q9H8J5 431 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 MALT1Q9UDY8 824 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 PTGDR2Q9Y5Y4 395 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 USF3Q68DE3 2245 aa4.02□□□□□ -1.77
SNCA-213ENST00000618500 PPIAL4EA0A075B759 164 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 PPIAL4CA0A0B4J2A2 164 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 FAM95CA0A1B0GW59 222 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 PPIAL4DF5H284 164 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 RTCAO00442 366 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 PGRMC2O15173 223 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 KIAA0513O60268 411 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 URI1O94763 535 aaPredicted RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 KRT14P02533 472 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 GSTA2P09210 222 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 LTA4HP09960 611 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 PPIAL4FP0DN26 164 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 PTMSP20962 102 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 IGHV1-2P23083 117 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 CPT2P23786 658 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 FKBP2P26885 142 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 C21orf58P58505 322 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 MGAT5Q09328 741 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 NAB1Q13506 487 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 EXOC3L2Q2M3D2 409 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SLC9B1Q4ZJI4 515 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 ANKRD34AQ69YU3 496 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 NUFIP2Q7Z417 695 aaKnown RBP4.01□□□□□ -1.77
SNCA-213ENST00000618500 PRUNE1Q86TP1 453 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 CCDC25Q86WR0 208 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 FAM9CQ8IZT9 166 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 OR4F15Q8NGB8 312 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 OR51F2Q8NH61 342 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 POC1BQ8TC44 478 aa4.01□□□□□ -1.77
SNCA-213ENST00000618500 SORCS2Q96PQ0 1159 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms