RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LSMEM1Q8N8F7 131 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 APCDD1LQ8NCL9 501 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FAM71CQ8NEG0 241 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OR2Y1Q8NGV0 311 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FBLIM1Q8WUP2 373 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HRASLS5Q96KN8 279 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FEVQ99581 238 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 APOL4Q9BPW4 351 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CRB3Q9BUF7 120 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MAN2C1Q9NTJ4 1040 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KCNE5Q9UJ90 142 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NDRG4Q9ULP0 352 aaKnown RBP11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 AK5Q9Y6K8 562 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SDK2Q58EX2 2172 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TRAPPC13A5PLN9 417 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OR2W5A6NFC9 320 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PEX12O00623 359 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CNOT3O75175 753 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CSO75390 466 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CYP7B1O75881 506 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MT-CO3P00414 261 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 IGKV1D-16P01601 117 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TBXA2RP21731 343 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PRKACGP22612 351 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KRT20P35900 424 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UGT2B15P54855 530 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NRG3P56975 720 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NPRL3Q12980 569 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 GANABQ14697 944 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C1orf94Q6P1W5 598 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HSDL2Q6YN16 418 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LANCL3Q6ZV70 420 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 THAP5Q7Z6K1 395 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 RNF113BQ8IZP6 322 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLC5A8Q8N695 610 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OR5L2Q8NGL0 311 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 WDR36Q8NI36 951 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLC7A13Q8TCU3 470 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ACOT11Q8WXI4 607 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MPP4Q96JB8 637 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MCHR1Q99705 422 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 BARD1Q99728 777 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 WDR77Q9BQA1 342 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SPRY4Q9C004 299 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TRIM2Q9C040 744 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NXF5Q9H1B4 397 aaKnown RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FBXO34Q9NWN3 711 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TUBA8Q9NY65 449 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MYRFQ9Y2G1 1151 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PTPRBP23467 1997 aa11.34□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TRBV4-1A0A0J9YWV2 114 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SERINC4A6NH21 518 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR6C70A6NIJ9 312 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 BCKDKO14874 412 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PLD2O14939 933 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TSPAN2O60636 221 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 STK17BO94768 372 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 JMJD7P0C870 316 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF28P17035 718 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CXCR4P61073 352 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CSNK2BP67870 215 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TUBA4AP68366 448 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RNF4P78317 190 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MYBPC1Q00872 1141 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PPP1R8Q12972 351 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TOP3AQ13472 1001 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PIN1Q13526 163 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 EFR3AQ14156 821 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TRIP6Q15654 476 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 EXT1Q16394 746 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ENTPD8Q5MY95 495 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FNDC7Q5VTL7 733 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PAPD4Q6PIY7 484 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OLIG3Q7RTU3 272 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RBM45Q8IUH3 476 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR4N2Q8NGD1 307 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ADAMTS16Q8TE57 1224 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 DOK4Q8TEW6 326 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HDAC2Q92769 488 aaKnown RBP11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MR1Q95460 341 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF566Q969W8 418 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HS6ST2Q96MM7 605 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LRFN3Q9BTN0 628 aa11.33□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF700Q9H0M5 742 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms