RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GFOD1Q9NXC2 390 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 SEC14L3Q9UDX4 400 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PPIEQ9UNP9 301 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF451Q9Y4E5 1061 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PCDHA1Q9Y5I3 950 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 NUBP2Q9Y5Y2 271 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MRPS18BQ9Y676 258 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 V9GYH0 126 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 GLYATL1P3A0A0U1RQE8 302 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 FAM240BA0A1B0GVZ2 78 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 OR2A25A4D2G3 310 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 C5orf52A6NGY3 159 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CXorf49A8MYA2 514 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PRMT5O14744 637 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MEIS2O14770 477 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 INPP4BO15327 924 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 TNFSF14O43557 240 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 IFNA2P01563 188 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 IFNGP01579 166 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CFIP05156 583 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CHRNGP07510 517 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 NMBP08949 121 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF865P0CJ78 1059 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ANXA3P12429 323 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 BMP3P12645 472 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CD58P19256 250 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ANXA7P20073 488 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ITGA3P26006 1051 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CD27P26842 260 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MFAP4P55083 255 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CLDN20P56880 219 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MYL7Q01449 175 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CRYZQ08257 329 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 SKP2Q13309 424 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 NAE1Q13564 534 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 DOC2BQ14184 412 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF79Q15937 498 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ZXDCQ2QGD7 858 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CDNFQ49AH0 187 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 DDI2Q5TDH0 399 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 C3P1Q6ZMU1 363 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MOB2Q70IA6 237 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PGAP1Q75T13 922 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 RTN4RL2Q86UN3 420 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 NAA40Q86UY6 237 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 GLCCI1Q86VQ1 547 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 LRRC18Q8N456 261 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 FSTL5Q8N475 847 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 SLC44A5Q8NCS7 719 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 COQ8AQ8NI60 647 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CNIH3Q8TBE1 160 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 STK35Q8TDR2 534 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 GPBAR1Q8TDU6 330 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 DUSP19Q8WTR2 217 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 GCDHQ92947 438 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 RPL10LQ96L21 214 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 KLHL5Q96PQ7 755 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PCDHB18PQ96TA0 734 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 RTP3Q9BQQ7 232 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 MUC13Q9H3R2 512 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 NXF3Q9H4D5 531 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 CDCP1Q9H5V8 836 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PIM2Q9P1W9 311 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 SUSD2Q9UGT4 822 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 DRG1Q9Y295 367 aaKnown RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF646O15015 1829 aaPredicted RBP4.43□□□□□ -1.7
LINC01109-201ENST00000603837 ROBO3Q96MS0 1386 aa4.43□□□□□ -1.7
LINC01109-201ENST00000603837 PLSCR5A0PG75 271 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CXorf65A6NEN9 183 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CD8B2A6NJW9 211 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 C1orf196B1AJZ1 125 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 D6RAR5 112 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 PRR23D1E9PI22 279 aaPredicted RBP4.42□□□□□ -1.7
LINC01109-201ENST00000603837 H0Y8G0 127 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 KLK8O60259 260 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 HPRP00739 348 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CTSBP07858 339 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 OR56A5P0C7T3 313 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 PRR23D2P0DMB1 279 aaPredicted RBP4.42□□□□□ -1.7
LINC01109-201ENST00000603837 C4BPBP20851 252 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CD72P21854 359 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 PAX6P26367 422 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 SLC6A6P31641 620 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 ISL1P61371 349 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 DHODHQ02127 395 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 TCP10Q12799 353 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 PTP4A2Q12974 167 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CDK5R2Q13319 367 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 ARL6IP1Q15041 203 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 NKAIN1Q4KMZ8 207 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 SOWAHCQ53LP3 525 aaPredicted RBP4.42□□□□□ -1.7
LINC01109-201ENST00000603837 HACD4Q5VWC8 232 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 FAM131AQ6UXB0 335 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 SLC47A2Q86VL8 602 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 RBM45Q8IUH3 476 aaKnown RBP4.42□□□□□ -1.7
LINC01109-201ENST00000603837 CBLN2Q8IUK8 224 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
LINC01109-201ENST00000603837 ENTHD1Q8IYW4 607 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms