RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CPTPQ5TA50 214 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 FBXW10Q5XX13 1052 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 SZRD1Q7Z422 152 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 MREGQ8N565 214 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 CHDHQ8NE62 594 aaPredicted RBP14.24□□□□□ -0.13
VRK3-221ENST00000600284 FIG4Q92562 907 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 COQ8BQ96D53 544 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 MBD6Q96DN6 1003 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 ZIM3Q96PE6 472 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 YIPF4Q9BSR8 244 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 BTBD2Q9BX70 525 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 PINK1Q9BXM7 581 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 LIME1Q9H400 295 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 PIGUQ9H490 435 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 RNF122Q9H9V4 155 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
VRK3-221ENST00000600284 PAQR5Q9NXK6 330 aaPredicted RBP14.24□□□□□ -0.13
VRK3-221ENST00000600284 MPDZO75970 2070 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 MED12LQ86YW9 2145 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 C7orf72A4D263 438 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 SH3D21A4FU49 640 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 CASKO14936 926 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 HMGN2P05204 90 aaKnown RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 LAMP1P11279 417 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 FCGR2AP12318 317 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 HPGDP15428 266 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 PRPS1L1P21108 318 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 ARRB2P32121 409 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 KIR2DL2P43627 348 aaPredicted RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 CLDN20P56880 219 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 POU6F2P78424 691 aaPredicted RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 MAD2L1Q13257 205 aaPredicted RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 SMU1Q2TAY7 513 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 IL23RQ5VWK5 629 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 FIGNL1Q6PIW4 674 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 NUDCD3Q8IVD9 361 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 GTPBP8Q8N3Z3 284 aaPredicted RBP14.23□□□□□ -0.13
VRK3-221ENST00000600284 COX18Q8N8Q8 333 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 FNDC5Q8NAU1 212 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 OR7A2PQ8NGA2 310 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 OR5M1Q8NGP8 315 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 AGR3Q8TD06 166 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 SMPDL3BQ92485 455 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 ZBTB8AQ96BR9 441 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 MOAP1Q96BY2 351 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 C16orf58Q96GQ5 468 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 C3orf30Q96M34 536 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 ELOVL5Q9NYP7 299 aa14.23□□□□□ -0.13
VRK3-221ENST00000600284 H0YC42 278 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SCDO00767 359 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SEC14L5O43304 696 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
VRK3-221ENST00000600284 SNUPNO95149 360 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 KRT16P08779 473 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 CD8BP10966 210 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 CREB1P16220 341 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 CCT3P49368 545 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 TPD52P55327 224 aaPredicted RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 C21orf58P58505 322 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 RAC1P63000 192 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 PTGR1Q14914 329 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 PON3Q15166 354 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SGCBQ16585 318 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 CDC73Q6P1J9 531 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 PAMR1Q6UXH9 720 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 BTLAQ7Z6A9 289 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 MTERF4Q7Z6M4 381 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 WDR75Q8IWA0 830 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 RIMKLAQ8IXN7 391 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 CNEP1R1Q8N9A8 125 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 OR56A1Q8NGH5 318 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 JADE3Q92613 823 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 TUBGCP3Q96CW5 907 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 PGM2Q96G03 612 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SLC39A3Q9BRY0 314 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 ACTRT3Q9BYD9 372 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 BHLHE41Q9C0J9 482 aaPredicted RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 HOXD1Q9GZZ0 328 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 PLEKHF2Q9H8W4 249 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 NEUROD4Q9HD90 331 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 SSU72Q9NP77 194 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 GIMAP2Q9UG22 337 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 EIF3LQ9Y262 564 aaKnown RBP14.22□□□□□ -0.13
VRK3-221ENST00000600284 VDAC3Q9Y277 283 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 MED13LQ71F56 2210 aa14.22□□□□□ -0.13
VRK3-221ENST00000600284 BIRC5O15392 142 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 SKAP2O75563 359 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 CGAP01215 116 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 RAF1P04049 648 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 HRGP04196 525 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 EFNA1P20827 205 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 CD79BP40259 229 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ZNF41P51814 821 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 EMX2Q04743 252 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 LASP1Q14847 261 aaKnown RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 GUSBP1Q15486 140 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 BHLHB9Q6PI77 547 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms