RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MED11Q9P086 117 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 BAIAP2L1Q9UHR4 511 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 SH3D21A4FU49 640 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 A8MXE2 369 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 PDPK1O15530 556 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 AKAP10O43572 662 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 RAF1P04049 648 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 IFI6P09912 130 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 DDX5P17844 614 aaKnown RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 HK1P19367 917 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 CPOXP36551 454 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 FOXD4Q12950 439 aaPredicted RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 BCL2A1Q16548 175 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 IL23RQ5VWK5 629 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 ANKRD26P1Q6NSI1 321 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 R3HCC1LQ7Z5L2 792 aaKnown RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 MARCH3Q86UD3 253 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 FIG4Q92562 907 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF75CPQ92670 426 aaPredicted RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 DTNBP1Q96EV8 351 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 PPP1R36Q96LQ0 422 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 DACH2Q96NX9 599 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 LMF2Q9BU23 707 aaKnown RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 PIGMQ9H3S5 423 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 AKTIPQ9H8T0 292 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 EDARQ9UNE0 448 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 ABCG2Q9UNQ0 655 aa13.68□□□□□ -0.22
TGFB1-202ENST00000597453 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
TGFB1-202ENST00000597453 NIPBLQ6KC79 2804 aaeCLIP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 SCAMP2O15127 329 aaKnown RBP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 HDAC3O15379 428 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 IL33O95760 270 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 IGKV1D-16P01601 117 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 PEPDP12955 493 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 FRKP42685 505 aaPredicted RBP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 RFX3P48380 749 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 PPP2R2AP63151 447 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 PTGR1Q14914 329 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 DECR1Q16698 335 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF385BQ569K4 471 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 RAET1LQ5VY80 246 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF551Q7Z340 670 aaPredicted RBP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 P4HA3Q7Z4N8 544 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 Q9N2J8 555 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 FAM120CQ9NX05 1096 aaKnown RBP13.67□□□□□ -0.22
TGFB1-202ENST00000597453 ATP6V1HQ9UI12 483 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF337Q9Y3M9 751 aa13.67□□□□□ -0.22
TGFB1-202ENST00000597453 GXYLT2A0PJZ3 443 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 OR2M5A3KFT3 312 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SDHDO14521 159 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SEC14L5O43304 696 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 G6PDP11413 515 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 PRPS1L1P21108 318 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 GABRA3P34903 492 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 DIO3P55073 304 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 CLDN20P56880 219 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 C21orf58P58505 322 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 ADAM8P78325 824 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 HSPB3Q12988 150 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 KEAP1Q14145 624 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 ZNHIT3Q15649 155 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 OGFOD2Q6N063 350 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 APOOLQ6UXV4 268 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 CAMKMTQ7Z624 323 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 MEIOBQ8N635 442 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 CNEP1R1Q8N9A8 125 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 LRRC8CQ8TDW0 803 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 DUSP19Q8WTR2 217 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 PIK3R3Q92569 461 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 CIDECQ96AQ7 238 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 ZBED6CLQ96FA7 236 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 POM121Q96HA1 1249 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 C7orf26Q96N11 449 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 EQTNQ9NQ60 294 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 DLL4Q9NR61 685 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SDHAF3Q9NRP4 125 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SH3BP4Q9P0V3 963 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 MARCOQ9UEW3 520 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-202ENST00000597453 TESMINQ9Y4I5 508 aa13.66□□□□□ -0.22
TGFB1-202ENST00000597453 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 H3BML4 177 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 MSTNO14793 375 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 GMFGO60234 142 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 GOSR1O95249 250 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 UTS2O95399 124 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms