RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 LIPT1Q9Y234 373 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 ZNF462Q96JM2 2506 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 NCKAP5O14513 1909 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 PCNX3Q9H6A9 2034 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 SHANK1Q9Y566 2161 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 AGAP5A6NIR3 686 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 CCT8L1PA6NM43 557 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 KLRC4-KLRK1H3BQV0 150 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 SNX4O95219 450 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 PGM3O95394 542 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 ANGPTL1O95841 491 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 BCHEP06276 602 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 PPIBP23284 216 aaKnown RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 RFX3P48380 749 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 B3GALT5-AS1P59052 145 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 SLC25A3Q00325 362 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 DMTNQ08495 405 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 GPR68Q15743 365 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 INAQ16352 499 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 NDUFAF6Q330K2 333 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 FLYWCH1Q4VC44 716 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 PDZK1Q5T2W1 519 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 OR5M10Q6IEU7 315 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 TRPM8Q7Z2W7 1104 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 SERPINA11Q86U17 422 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 ZNF619Q8N2I2 560 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 FAM71CQ8NEG0 241 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 OR2M3Q8NG83 312 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 NFKBIDQ8NI38 313 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 ARSGQ96EG1 525 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 NSL1Q96IY1 281 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 HOPXQ9BPY8 73 aaPredicted RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 TREX2Q9BQ50 279 aaPredicted RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 DOHHQ9BU89 302 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 OSBPL11Q9BXB4 747 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 ZNF703Q9H7S9 590 aaPredicted RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 MTHFD2LQ9H903 347 aaPredicted RBP9.63□□□□□ -0.87
LIG1-210ENST00000596332 ZFP64Q9NPA5 681 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 EXD2Q9NVH0 621 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 CD300AQ9UGN4 299 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 ICAM5Q9UMF0 924 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 WDR45Q9Y484 360 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 DTNAQ9Y4J8 743 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 WIF1Q9Y5W5 379 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 LIPGQ9Y5X9 500 aa9.63□□□□□ -0.87
LIG1-210ENST00000596332 NINQ8N4C6 2090 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 RELNP78509 3460 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 SERINC4A6NH21 518 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HNRNPCL2B2RXH8 293 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 GNB5O14775 395 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 SCO2O43819 266 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 EFNA2O43921 213 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HS6ST1O60243 411 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 TPST1O60507 370 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HNRNPCL1O60812 293 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 UBOX5O94941 541 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 IGHG3P01860 377 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HPNP05981 417 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 ENDOUP21128 410 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 PGM1P36871 562 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 MAGEA5P43359 124 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PSMD4P55036 377 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 PSME3P61289 254 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PPIAP62937 165 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 EEF1A1P68104 462 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 CBX1P83916 185 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 CDK6Q00534 326 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 FGFBP1Q14512 234 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 FXNQ16595 210 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 TMEM44Q2T9K0 475 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 GPAT3Q53EU6 434 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PRAMEF8Q5VWM4 474 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PRAMEF7Q5VXH5 474 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 ANGPTL8Q6UXH0 198 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 BNC2Q6ZN30 1099 aaPredicted RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 C16orf62Q7Z3J2 963 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 VRK2Q86Y07 508 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PLCZ1Q86YW0 608 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 CLIP4Q8N3C7 705 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 METTL25Q8N6Q8 603 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 GATSQ8NAP1 163 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PCYOX1LQ8NBM8 494 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 NR4A3Q92570 626 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PMM1Q92871 262 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 MIB2Q96AX9 1013 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 THUMPD3Q9BV44 507 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 HOXD1Q9GZZ0 328 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 TSPAN10Q9H1Z9 355 aaPredicted RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 RAD21L1Q9H4I0 556 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 PIF1Q9H611 641 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 METTL7AQ9H8H3 244 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 GID8Q9NWU2 228 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms