RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SERPINI1Q99574 410 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 NPLQ9BXD5 320 aaPredicted RBP5.43□□□□□ -1.54
VPS25-204ENST00000589577 SHCBP1LQ9BZQ2 653 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 FAM107BQ9H098 131 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 ALG2Q9H553 416 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 CCDC134Q9H6E4 229 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 NT5DC2Q9H857 520 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 BRF2Q9HAW0 419 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 SERHLQ9NQF3 203 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 ZNF490Q9ULM2 529 aaPredicted RBP5.43□□□□□ -1.54
VPS25-204ENST00000589577 DAPP1Q9UN19 280 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 PROCRQ9UNN8 238 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 TRIM33Q9UPN9 1127 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 WBP11Q9Y2W2 641 aaKnown RBP5.43□□□□□ -1.54
VPS25-204ENST00000589577 TRAF6Q9Y4K3 522 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 SPACA6W5XKT8 324 aa5.43□□□□□ -1.54
VPS25-204ENST00000589577 GMNCA6NCL1 334 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 C2orf72A6NCS6 295 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 SYNDIG1LA6NDD5 238 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 DPRXA6NFQ7 191 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 H7C417 338 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FOXE1O00358 373 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 MANBAO00462 879 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 HDAC3O15379 428 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 ERI3O43414 337 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 FGF17O60258 216 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 EDF1O60869 148 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 CLEC3AO75596 197 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 LYPLA1O75608 230 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 AQP8O94778 261 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 TGDSO95455 350 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 CHRNGP07510 517 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 SERPINA6P08185 405 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FGF4P08620 206 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 KITP10721 976 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 APEHP13798 732 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 TNNI3P19429 210 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 PTX3P26022 381 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 LSP1P33241 339 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 SRP14P37108 136 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 SSR2P43308 183 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 NR4A2P43354 598 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 ARFIP2P53365 341 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 SLC37A1P57057 533 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 C21orf58P58505 322 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 B3GALT5-AS1P59052 145 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 HILS1P60008 231 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 STX1BP61266 288 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 IGLV3-21P80748 117 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 PCDH1Q08174 1060 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 LGALS3BPQ08380 585 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 STX4Q12846 297 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 TSC22D1Q15714 1073 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 AP5B1Q2VPB7 878 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 CTU2Q2VPK5 515 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 TMEM35AQ53FP2 167 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FBLN7Q53RD9 439 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 SPIN4Q56A73 249 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 CLEC6AQ6EIG7 209 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 LETMD1Q6P1Q0 360 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 RPS27LQ71UM5 84 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 IFNEQ86WN2 208 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 WDSUB1Q8N9V3 476 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 OR7G3Q8NG95 312 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 OR1J4Q8NGS1 313 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 OR14L1PQ8NHC6 308 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FNDC9Q8TBE3 224 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 TWIST2Q8WVJ9 160 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 RGMAQ96B86 450 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 PPWD1Q96BP3 646 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 C3orf49Q96BT1 292 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 S100PBPQ96BU1 408 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 TUBGCP3Q96CW5 907 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 WDR34Q96EX3 536 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FBXL20Q96IG2 436 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 METTL2AQ96IZ6 378 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 ADAD1Q96M93 576 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 CDK15Q96Q40 435 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 MTERF1Q99551 399 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 PKP2Q99959 881 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 WDR41Q9HAD4 459 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 ZBTB26Q9HCK0 441 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 PLSCR4Q9NRQ2 329 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 FGFR1OP2Q9NVK5 253 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 CISD1Q9NZ45 108 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 KLHL14Q9P2G3 628 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 MARCOQ9UEW3 520 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 TMEFF2Q9UIK5 374 aaPredicted RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 SLC12A4Q9UP95 1085 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 MRPS33Q9Y291 106 aaKnown RBP5.42□□□□□ -1.54
VPS25-204ENST00000589577 RNF11Q9Y3C5 154 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 TSC22D4Q9Y3Q8 395 aa5.42□□□□□ -1.54
VPS25-204ENST00000589577 RYR2Q92736 4967 aa5.41□□□□□ -1.54
VPS25-204ENST00000589577 A0A0G2JND7 137 aa5.41□□□□□ -1.54
VPS25-204ENST00000589577 GNG14A0A1W2PPG7 69 aa5.41□□□□□ -1.54
VPS25-204ENST00000589577 LRIT2A6NDA9 550 aa5.41□□□□□ -1.54
VPS25-204ENST00000589577 LINC01387J3KSC0 135 aa5.41□□□□□ -1.54
VPS25-204ENST00000589577 OR7A17O14581 309 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms