RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TRAF6Q9Y4K3 522 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 AP4B1Q9Y6B7 739 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 VPS13CQ709C8 3753 aa12.9□□□□□ -0.35
VMP1-206ENST00000587945 NF1P21359 2839 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 ALG1L2C9J202 215 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 EIF1AYO14602 144 aaKnown RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 EMC8O43402 210 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 NDUFB5O43674 189 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 GOSR1O95249 250 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 CGAP01215 116 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 POU2F1P14859 743 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 CD53P19397 219 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 CCKARP32238 428 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 EIF1AXP47813 144 aaKnown RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 SGCBQ16585 318 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 CCNJQ5T5M9 372 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 ZNF550Q7Z398 422 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 TRABD2AQ86V40 505 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 OR7A2PQ8NGA2 310 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 FAM110BQ8TC76 370 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 JADE3Q92613 823 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 SH3YL1Q96HL8 342 aaPredicted RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 MS4A4EQ96PG1 132 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 L2HGDHQ9H9P8 463 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 SIRT3Q9NTG7 399 aaPredicted RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 ACSS1Q9NUB1 689 aaPredicted RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 MKS1Q9NXB0 559 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 CLEC4AQ9UMR7 237 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 EIF3LQ9Y262 564 aaKnown RBP12.89□□□□□ -0.35
VMP1-206ENST00000587945 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
VMP1-206ENST00000587945 A0A1W2PRB8 838 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 DEFB108AA8MXU0 73 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 NPHS1O60500 1241 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 PEX11AO75192 247 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 FGF4P08620 206 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ALOX5P09917 674 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 TBXA2RP21731 343 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ARRB2P32121 409 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 UGT2B10P36537 528 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ASMTP46597 345 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 KCNJ5P48544 419 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
VMP1-206ENST00000587945 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 EXOC3L2Q2M3D2 409 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 COX18Q8N8Q8 333 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
VMP1-206ENST00000587945 CHMP6Q96FZ7 201 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ZC3HAV1LQ96H79 300 aaKnown RBP12.88□□□□□ -0.35
VMP1-206ENST00000587945 C3orf30Q96M34 536 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 MED18Q9BUE0 208 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 MED17Q9NVC6 651 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 ACANP16112 2415 aa12.88□□□□□ -0.35
VMP1-206ENST00000587945 SCAMP2O15127 329 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 NGFRP08138 427 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 CD8BP10966 210 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 LAMP1P11279 417 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 CREB1P16220 341 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 HOXC12P31275 282 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 HPCAL1P37235 193 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 LASP1Q14847 261 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 CD226Q15762 336 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.87□□□□□ -0.35
VMP1-206ENST00000587945 EXOSC6Q5RKV6 272 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 C22orf34Q6ZV56 151 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 KRTAP1-3Q8IUG1 177 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 OR6Y1Q8NGX8 325 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 OR10D3Q8NH80 312 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 TCP10LQ8TDR4 215 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 PIK3IP1Q96FE7 263 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 POM121Q96HA1 1249 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 UBQLN4Q9NRR5 601 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
VMP1-206ENST00000587945 MAP1AP78559 2803 aaPredicted RBP12.87□□□□□ -0.35
VMP1-206ENST00000587945 A0A087WZY1 265 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 SCDO00767 359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms