RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MARCH3Q86UD3 253 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 Q8NA96 180 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 TNIP2Q8NFZ5 429 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 OR2T12Q8NG77 320 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 OR4K17Q8NGC6 315 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 PHOSPHO1Q8TCT1 267 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 FRMD6Q96NE9 622 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 TTTY12Q9BZ98 90 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 ARMC7Q9H6L4 198 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 BCL2L10Q9HD36 194 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 ZNF232Q9UNY5 417 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 IFT52Q9Y366 437 aa13.34□□□□□ -0.27
SCAMP4-209ENST00000585335 KMT2BQ9UMN6 2715 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 NPIPA5A0A0B4J1W7 369 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PRAMEF27A3QJZ7 478 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 AGAP5A6NIR3 686 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 FAM47E-STBD1D6RA91 191 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 NPIPA7E9PJI5 369 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 NPIPB9F8W1W9 429 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 GNB5O14775 395 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 SNPHO15079 494 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 SERPINB7O75635 380 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 UBOX5O94941 541 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PGM3O95394 542 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 NPIPA8P0DM63 369 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 UBL4AP11441 157 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 ETS2P15036 469 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 IL7RP16871 459 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PTGDSP41222 190 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PPIAP62937 165 aaKnown RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PMP22Q01453 160 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 LIPEQ05469 1076 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 VMACQ2NL98 169 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 LIN52Q52LA3 116 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 KLHL26Q53HC5 615 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 RPS26P11Q5JNZ5 115 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 TIGD3Q6B0B8 471 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 C8orf82Q6P1X6 216 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 EIF3MQ7L2H7 374 aaKnown RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PLCZ1Q86YW0 608 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 CMIPQ8IY22 773 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 SLC15A3Q8IY34 581 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 BBC3Q96PG8 261 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 KCTD14Q9BQ13 255 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PIF1Q9H611 641 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PTGES2Q9H7Z7 377 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 CMTM6Q9NX76 183 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 SLC35A3Q9Y2D2 325 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 PIEZO2Q9H5I5 2752 aa13.33□□□□□ -0.28
SCAMP4-209ENST00000585335 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 PRORSD1PA6NEY8 169 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 GSTA4O15217 222 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 GMNNO75496 209 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 UGT2B17O75795 530 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 CBR3O75828 277 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 ATP5HO75947 161 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 ZIC2O95409 532 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 CSTAP01040 98 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 THBS1P07996 1170 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 GDF1P27539 372 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 MSX1P28360 303 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 RFC3P40938 356 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 GAS1P54826 345 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 SLC25A3Q00325 362 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 FOXO1Q12778 655 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 TOMM20Q15388 145 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 INPP5JQ15735 1006 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 ADRM1Q16186 407 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 HYAL4Q2M3T9 481 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 SPATS1Q496A3 300 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 SOWAHCQ53LP3 525 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 BNC2Q6ZN30 1099 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 OLIG3Q7RTU3 272 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 IFNEQ86WN2 208 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 PTOV1Q86YD1 416 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 MICU2Q8IYU8 434 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 C10orf111Q8N326 155 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 FAM109AQ8N4B1 249 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 GATSQ8NAP1 163 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 OR52P1PQ8NH57 321 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 DUSP19Q8WTR2 217 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 ZNF583Q96ND8 569 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 ALG2Q9H553 416 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 OLAHQ9NV23 265 aa13.32□□□□□ -0.28
SCAMP4-209ENST00000585335 QPCTLQ9NXS2 382 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms