RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KLK13Q9UKR3 277 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIP12Q14669 1992 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM186AA6NE01 2351 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CHD8Q9HCK8 2581 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HELZ2Q9BYK8 2649 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OTOGLQ3ZCN5 2332 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0G2JPF8 293 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OR5K3A6NET4 321 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C5orf60A6NFR6 353 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PP2D1A8MPX8 630 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPCL3B7ZW38 293 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 K7EPI3 171 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 WNT9BO14905 357 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CHUKO15111 745 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ARPC2O15144 300 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCL16O15467 120 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SPRY3O43610 288 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SCO2O43819 266 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FCGR3BO75015 233 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FTH1P02794 183 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ANKRD34CP0C6C1 535 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CISD3P0C7P0 127 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HSMCR30P0CW71 290 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPCL4P0DMR1 293 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FCGR1AP12314 374 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ATF6P18850 670 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HNRNPA2B1P22626 353 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CALB2P22676 271 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 RPS3P23396 243 aaKnown RBP eCLIP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACADLP28330 430 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CORO1AP31146 461 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PHBP35232 272 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 IER3P46695 156 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 GBX2P52951 348 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 UCP2P55851 309 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ATP5IP56385 69 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZP1P60852 638 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACTR1AP61163 376 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 GABPB1Q06547 395 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF235Q14590 738 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OPCMLQ14982 345 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ARHGAP19Q14CB8 494 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SF3B4Q15427 424 aaKnown RBP eCLIP1.75□□□□□ -2.139e-7■■■■■ 33.5
SMCHD1-211ENST00000584897 CEBPEQ15744 281 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 WHAMMP3Q1A5X7 153 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PARP6Q2NL67 630 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF284Q2VY69 593 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MAJINQ3KP22 176 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PDLIM3Q53GG5 364 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TDRD12Q587J7 1177 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TFDP3Q5H9I0 405 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 Q5PR19 223 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C1orf220Q5T0J3 134 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC122Q5T0U0 273 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRR27Q6MZM9 219 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SIGLEC15Q6ZMC9 328 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM26Q6ZUK4 368 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF367Q7RTV3 350 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMPRSS11BQ86T26 416 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF554Q86TJ5 538 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACOT1Q86TX2 421 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF573Q86YE8 665 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CNTN4Q8IWV2 1026 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF595Q8IYB9 648 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 UBQLNLQ8IYU4 475 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 UBE2J2Q8N2K1 259 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TRAM1L1Q8N609 369 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC17Q8N6Y2 441 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC197Q8NCU1 140 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OR2AP1Q8NGE2 309 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 OR5B17Q8NGF7 314 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CXorf40AQ8TE69 158 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PHYHIPQ92561 330 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 P3H4Q92791 437 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 UBE2E3Q969T4 207 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NXPE2Q96DL1 559 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DTD2Q96FN9 168 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM71F1Q96KD3 344 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRMT1Q99873 361 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ASCL2Q99929 193 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC77Q9BR77 488 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MRPL45Q9BRJ2 306 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PELOQ9BRX2 385 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC39A3Q9BRY0 314 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SYT11Q9BT88 431 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FICDQ9BVA6 458 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 BLZF1Q9H2G9 400 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ADNPQ9H2P0 1102 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACTL8Q9H568 366 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LMAN1LQ9HAT1 526 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MYNNQ9NPC7 610 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SIX2Q9NPC8 291 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM9BQ9NQ34 198 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TEX10Q9NXF1 929 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NLGN3Q9NZ94 848 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 EIF3KQ9UBQ5 218 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 IL36AQ9UHA7 158 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NXT1Q9UKK6 140 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 KCNS2Q9ULS6 477 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HYOU1Q9Y4L1 999 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms