RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RLN1P04808 185 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 MELTFP08582 738 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 KRT7P08729 469 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 AHCYP23526 432 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 DNASE1P24855 282 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 FRKP42685 505 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 TNFRSF4P43489 277 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ASMTP46597 345 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 RPL21P46778 160 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 KCNJ1P48048 391 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SGSHP51688 502 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ADARP55265 1226 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 CDH13P55290 713 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 PEX3P56589 373 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 RPS14P62263 151 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 ACSM1Q08AH1 577 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 HSPB3Q12988 150 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 TRDNQ13061 729 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 TRA2AQ13595 282 aaKnown RBP eCLIP2.16□□□□□ -2.06
VAPA-208ENST00000584796 TFDP1Q14186 410 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 PDIA5Q14554 519 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 NR1D2Q14995 579 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 HERC3Q15034 1050 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SGCBQ16585 318 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CDO1Q16878 200 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 VWC2Q2TAL6 325 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 DCAF4L1Q3SXM0 396 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 AARDQ4LEZ3 155 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZNF542PQ5EBM4 170 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 TPRG1LQ5T0D9 272 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ATP1A1-AS1Q5TC04 95 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 NEK5Q6P3R8 708 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 GUSBP11Q6P575 273 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 TEX38Q6PEX7 206 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 MFSD7Q6UXD7 560 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 GDPGP1Q6ZNW5 385 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CCDC73Q6ZRK6 1079 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 RGS9BPQ6ZS82 235 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZBTB49Q6ZSB9 765 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 RBM43Q6ZSC3 357 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 TPGS1Q6ZTW0 290 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 LDB1Q86U70 411 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 RTN4RL2Q86UN3 420 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZFAND4Q86XD8 727 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CATSPER3Q86XQ3 398 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SIAH3Q8IW03 269 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CFAP206Q8IYR0 622 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 BLIDQ8IZY5 108 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SLC34A3Q8N130 599 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 METTL4Q8N3J2 472 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 FGFRL1Q8N441 504 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 PDCL2Q8N4E4 241 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SLC4A11Q8NBS3 891 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 NEK11Q8NG66 645 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 OR11H4Q8NGC9 324 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 OR13C3Q8NGS6 347 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 OCC1Q8TAD7 63 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZNF564Q8TBZ8 553 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 KIAA1524Q8TCG1 905 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 WFDC5Q8TCV5 224 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ST7LQ8TDW4 575 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CCDC107Q8WV48 283 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 APOBEC4Q8WW27 367 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 MRPS31Q92665 395 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 RFT1Q96AA3 541 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 NXNL1Q96CM4 212 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SNRNP40Q96DI7 357 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZNF578Q96N58 590 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 JPH2Q9BR39 696 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 KATNB1Q9BVA0 655 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 OSBPL8Q9BZF1 889 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 DPH5Q9H2P9 285 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 RWDD1Q9H446 243 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 TUBB1Q9H4B7 451 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 C6orf50Q9HD87 102 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 EQTNQ9NQ60 294 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SLC35D1Q9NTN3 355 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 LARSQ9P2J5 1176 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 RABL2AQ9UBK7 228 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 SLC24A2Q9UI40 661 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ZNF107Q9UII5 783 aaPredicted RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 LAMP5Q9UJQ1 280 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 TDRKHQ9Y2W6 561 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 STRAPQ9Y3F4 350 aaKnown RBP2.16□□□□□ -2.06
VAPA-208ENST00000584796 WIPI2Q9Y4P8 454 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 ASB3Q9Y575 518 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 CLCA3PQ9Y6N3 262 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 PCM1Q15154 2024 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 DOCK4Q8N1I0 1966 aa2.16□□□□□ -2.06
VAPA-208ENST00000584796 SVEP1Q4LDE5 3571 aa2.15□□□□□ -2.06
VAPA-208ENST00000584796 MEGF8Q7Z7M0 2845 aa2.15□□□□□ -2.06
VAPA-208ENST00000584796 NCOA6Q14686 2063 aaPredicted RBP2.15□□□□□ -2.07
VAPA-208ENST00000584796 TRBV2A0A0J9YWF9 115 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 C13orf42A0A1B0GVH6 325 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 A0A1W2PPM1 405 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 FAM47DPA6NHR8 397 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 ANKRD63C9JTQ0 380 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 NEDD8-MDP1E9PL57 170 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 E9PMD0 336 aa2.15□□□□□ -2.07
VAPA-208ENST00000584796 CACNB4O00305 520 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms