RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GMFGO60234 142 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 SEC22BO75396 215 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 URI1O94763 535 aaPredicted RBP16.03■□□□□ 0.16
MKS1-209ENST00000580127 PSMG1O95456 288 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 HSPA4LO95757 839 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 TP53P04637 393 aaPredicted RBP16.03■□□□□ 0.16
MKS1-209ENST00000580127 TUBBP07437 444 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 DDX5P17844 614 aaKnown RBP16.03■□□□□ 0.16
MKS1-209ENST00000580127 LOXP28300 417 aaPredicted RBP16.03■□□□□ 0.16
MKS1-209ENST00000580127 SERPINB4P48594 390 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 HTR6P50406 440 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 CARD18P57730 90 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.03■□□□□ 0.16
MKS1-209ENST00000580127 TMEM44Q2T9K0 475 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 CFAP157Q5JU67 520 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 NOXRED1Q6NXP6 359 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 TRIM46Q7Z4K8 759 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 MISPQ8IVT2 679 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 CDRT4Q8N9R6 151 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 OR6Y1Q8NGX8 325 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.03■□□□□ 0.16
MKS1-209ENST00000580127 MDFIQ99750 246 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 ACTR6Q9GZN1 396 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 USF3Q68DE3 2245 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 VPS13CQ709C8 3753 aa16.03■□□□□ 0.16
MKS1-209ENST00000580127 ALG1L2C9J202 215 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 THBDP07204 575 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 NGFRP08138 427 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 CTAGE8P0CG41 777 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 IDUAP35475 653 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 RPS4XP62701 263 aaKnown RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 UBAP2Q5T6F2 1119 aaKnown RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 HBMQ6B0K9 141 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 C22orf34Q6ZV56 151 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 TRMT10CQ7L0Y3 403 aaKnown RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 GGNQ86UU5 652 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 CTAGE4Q8IX94 777 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 OR2V1Q8NHB1 315 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 OSTF1Q92882 214 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 ZBED6CLQ96FA7 236 aaPredicted RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 KCNA7Q96RP8 456 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 RTN4RQ9BZR6 473 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 ESRP2Q9H6T0 727 aaKnown RBP16.02■□□□□ 0.16
MKS1-209ENST00000580127 EQTNQ9NQ60 294 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 UBQLN4Q9NRR5 601 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 CLEC4AQ9UMR7 237 aa16.02■□□□□ 0.16
MKS1-209ENST00000580127 C7orf72A4D263 438 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 GJE1A6NN92 205 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 SCDO00767 359 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 PDPK1O15530 556 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 CXCL13O43927 109 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 RSL1D1O76021 490 aaKnown RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 ABHD2P08910 425 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 MYL2P10916 166 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 PSMB1P20618 241 aaKnown RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 SLC6A8P48029 635 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 PRKAG1P54619 331 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 MANFP55145 182 aaKnown RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 ALKBH2Q6NS38 261 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 ZCCHC12Q6PEW1 402 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 HSD17B8Q92506 261 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 SLC9A6Q92581 669 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 AKAP1Q92667 903 aaKnown RBP eCLIP16.01■□□□□ 0.15
MKS1-209ENST00000580127 GTPBP3Q969Y2 492 aaKnown RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 LAMP3Q9UQV4 416 aa16.01■□□□□ 0.15
MKS1-209ENST00000580127 POLR3HQ9Y535 204 aaPredicted RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 RAI1Q7Z5J4 1906 aaPredicted RBP16.01■□□□□ 0.15
MKS1-209ENST00000580127 GXYLT2A0PJZ3 443 aa16■□□□□ 0.15
MKS1-209ENST00000580127 SLC28A1O00337 649 aa16■□□□□ 0.15
MKS1-209ENST00000580127 CRLF1O75462 422 aa16■□□□□ 0.15
MKS1-209ENST00000580127 SOX30O94993 753 aa16■□□□□ 0.15
MKS1-209ENST00000580127 NKX2-2O95096 273 aa16■□□□□ 0.15
MKS1-209ENST00000580127 IFNA2P01563 188 aa16■□□□□ 0.15
MKS1-209ENST00000580127 CD3EP07766 207 aa16■□□□□ 0.15
MKS1-209ENST00000580127 SLC18A2Q05940 514 aa16■□□□□ 0.15
MKS1-209ENST00000580127 HSPB3Q12988 150 aa16■□□□□ 0.15
MKS1-209ENST00000580127 TNK1Q13470 666 aa16■□□□□ 0.15
MKS1-209ENST00000580127 ADAM5Q6NVV9 412 aa16■□□□□ 0.15
MKS1-209ENST00000580127 APOOLQ6UXV4 268 aa16■□□□□ 0.15
MKS1-209ENST00000580127 CXXC5Q7LFL8 322 aaKnown RBP16■□□□□ 0.15
MKS1-209ENST00000580127 TRABD2AQ86V40 505 aa16■□□□□ 0.15
MKS1-209ENST00000580127 LILRA2Q8N149 483 aa16■□□□□ 0.15
MKS1-209ENST00000580127 NUP43Q8NFH3 380 aa16■□□□□ 0.15
MKS1-209ENST00000580127 OR4C3Q8NH37 302 aa16■□□□□ 0.15
MKS1-209ENST00000580127 IGFBPL1Q8WX77 278 aa16■□□□□ 0.15
MKS1-209ENST00000580127 PIK3R3Q92569 461 aa16■□□□□ 0.15
MKS1-209ENST00000580127 TMEM204Q9BSN7 226 aa16■□□□□ 0.15
MKS1-209ENST00000580127 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
MKS1-209ENST00000580127 A0A1W2PRB8 838 aa15.99■□□□□ 0.15
MKS1-209ENST00000580127 SHISA8B8ZZ34 492 aa15.99■□□□□ 0.15
MKS1-209ENST00000580127 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
MKS1-209ENST00000580127 TNFSF11O14788 317 aa15.99■□□□□ 0.15
MKS1-209ENST00000580127 RGS14O43566 566 aa15.99■□□□□ 0.15
MKS1-209ENST00000580127 OXSR1O95747 527 aaPredicted RBP15.99■□□□□ 0.15
MKS1-209ENST00000580127 OPN1LWP04000 364 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms