RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 IGFL2Q6UWQ7 119 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 C16orf62Q7Z3J2 963 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 VTCN1Q7Z7D3 282 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 SLC44A2Q8IWA5 706 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-217ENST00000577897 GPR135Q8IZ08 494 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-217ENST00000577897 LINC00471Q8N535 108 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 PIK3C3Q8NEB9 887 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 FAM110BQ8TC76 370 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF681Q96N22 645 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 KLHL28Q9NXS3 571 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 NTMQ9P121 344 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 CDC14AQ9UNH5 594 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 PCDHGB6Q9Y5F9 930 aa12.97□□□□□ -0.33
SREBF1-217ENST00000577897 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
SREBF1-217ENST00000577897 NBEAL1Q6ZS30 2694 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CCDC88CQ9P219 2028 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 NUP210LQ5VU65 1888 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 C4orf51C9J302 202 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TNFRSF11BO00300 401 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CNOT3O75175 753 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CLPTM1O96005 669 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 HMGN2P05204 90 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 UMODP07911 640 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 C8orf89P0DMQ9 161 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 IGFBP5P24593 272 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 RRM2P31350 389 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CASP9P55211 416 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ADORA2A-AS1P86434 159 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 PPP2R2BQ00005 443 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 LASP1Q14847 261 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CDSNQ15517 529 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 PRTGQ2VWP7 1150 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 KCTD21Q4G0X4 260 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 GPAT3Q53EU6 434 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF324BQ6AW86 544 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 FAAH2Q6GMR7 532 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF595Q8IYB9 648 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TAGAPQ8N103 731 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ATG16L2Q8NAA4 619 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 GIPC3Q8TF64 312 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 PMM1Q92871 262 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TAMM41Q96BW9 452 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF354BQ96LW1 612 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TRNT1Q96Q11 434 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF300Q96RE9 604 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 PIP5K1AQ99755 562 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 TUBA8Q9NY65 449 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 PDP1Q9P0J1 537 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ZNF232Q9UNY5 417 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
SREBF1-217ENST00000577897 SEC16AO15027 2179 aa12.96□□□□□ -0.34
SREBF1-217ENST00000577897 A0A087WXM4 84 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 HYKKA2RU49 373 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 TTC36A6NLP5 189 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 H0YIG0 161 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 DYRK3O43781 588 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 OR10H2O60403 315 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■□□□ 14
SREBF1-217ENST00000577897 ATP1B1P05026 303 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 MC3RP41968 323 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 SMSP52788 366 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 CASP6P55212 293 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 ADARB1P78563 741 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 DCDP81605 110 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 VLDLRP98155 873 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 SPIBQ01892 262 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 STX4Q12846 297 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 ZNHIT3Q15649 155 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 RPUSD3Q6P087 351 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 FAM180BQ6P0A1 224 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 CDC73Q6P1J9 531 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 ZNF675Q8TD23 568 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 PHF10Q8WUB8 498 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 THOC3Q96J01 351 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 C10orf90Q96M02 699 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 TAAR6Q96RI8 345 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 APOL4Q9BPW4 351 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 NDC1Q9BTX1 674 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 PINK1Q9BXM7 581 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 KRT84Q9NSB2 600 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
SREBF1-217ENST00000577897 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 IFT52Q9Y366 437 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
SREBF1-217ENST00000577897 HSPE1-MOB4S4R3N1 261 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms