RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 GP6Q9HCN6 339 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 HHATLQ9HCP6 504 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 MYNNQ9NPC7 610 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 TIGARQ9NQ88 270 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 NPAP1Q9NZP6 1156 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 KLHL13Q9P2N7 655 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 SLC17A6Q9P2U8 582 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 OPTCQ9UBM4 332 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ZNF639Q9UID6 485 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PSME2Q9UL46 239 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PCDHB10Q9UN67 800 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GPR55Q9Y2T6 319 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 TSC22D4Q9Y3Q8 395 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 OR10H1Q9Y4A9 318 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PCDHGA11Q9Y5H2 935 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 C17orf51A8MQB3 221 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 B4DXG7 233 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 K7EPI3 171 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 TNFSF11O14788 317 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 RGS9O75916 674 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 TPPPO94811 219 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SEMA3DO95025 777 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 IL33O95760 270 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 GBAP04062 536 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ERCC1P07992 297 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 PCSK2P16519 638 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 EPORP19235 508 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 CSNK2A2P19784 350 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 FEN1P39748 380 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 DVL1P1P54792 670 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 PSMD4P55036 377 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 CDH15P55291 814 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SH3BGRP55822 239 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 SESN3P58005 492 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ATP6V0D1P61421 351 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 RAC1P63000 192 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 MRPS35P82673 323 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 CAV1Q03135 178 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SPOCK1Q08629 439 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ZNF155Q12901 538 aaPredicted RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 ILF2Q12905 390 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 MORF4L2Q15014 288 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ZNF239Q16600 458 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 LIPJQ5W064 366 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 C8orf74Q6P047 294 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 EMBQ6PCB8 327 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SLC46A3Q7Z3Q1 461 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 PEG10Q86TG7 708 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 GLCCI1Q86VQ1 547 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 TUSC5Q8IXB3 177 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 PPIL6Q8IXY8 311 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 AGGF1Q8N302 714 aaeCLIP5.2□□□□□ -1.58
SMG6-219ENST00000575663 RNF175Q8N4F7 328 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 NAT8LQ8N9F0 302 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 TOR1AIP2Q8NFQ8 470 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ABHD3Q8WU67 409 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ANKRD49Q8WVL7 239 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ZBTB8AQ96BR9 441 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 KLHL29Q96CT2 875 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ERP27Q96DN0 273 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 MPP4Q96JB8 637 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SORCS2Q96PQ0 1159 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 TBL1XR1Q9BZK7 514 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 CD244Q9BZW8 370 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SAP130Q9H0E3 1048 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 FKRPQ9H9S5 495 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SAYSD1Q9NPB0 183 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 PFDN4Q9NQP4 134 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 SENP1Q9P0U3 644 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ARMCX1Q9P291 453 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 MRTO4Q9UKD2 239 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 USP22Q9UPT9 525 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 VDAC3Q9Y277 283 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 UTP11Q9Y3A2 253 aaKnown RBP5.2□□□□□ -1.58
SMG6-219ENST00000575663 ANGPTL3Q9Y5C1 460 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 PCDHGB1Q9Y5G3 927 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ZNF780BQ9Y6R6 833 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 ROS1P08922 2347 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 NINQ8N4C6 2090 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 MED12LQ86YW9 2145 aa5.2□□□□□ -1.58
SMG6-219ENST00000575663 A0A087WZY1 265 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NPIPA5A0A0B4J1W7 369 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 LRP5LA4QPB2 252 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 OR5H1A6NKK0 313 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 SHISA8B8ZZ34 492 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NPIPA7E9PJI5 369 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 H0YIV9 168 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 M0R1B8 84 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FOXE1O00358 373 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 ADAMDEC1O15204 470 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 GMFGO60234 142 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 KERAO60938 352 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ALX3O95076 343 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CCDC159P0C7I6 412 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NPIPA8P0DM63 369 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CT45A8P0DMV1 189 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CT45A9P0DMV2 189 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 H2AFXP16104 143 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 COX5AP20674 150 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CD40P25942 277 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms