RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 STACQ99469 402 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 PIGQQ9BRB3 760 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 MEAF6Q9HAF1 191 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 MCCC2Q9HCC0 563 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 DUSP22Q9NRW4 184 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 CLCF1Q9UBD9 225 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 L3MBTL1Q9Y468 752 aa16.07■□□□□ 0.16
CTDNEP1-207ENST00000572043 GOLGA8QA0A0J9YX86 632 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 RNF103-CHMP3A0A140T963 221 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 GOLGA8OA6NCC3 632 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 C9JVG2 144 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 GOLGA8NF8WBI6 632 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 CPSF4O95639 269 aaKnown RBP16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 TGM6O95932 706 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 OPRM1P35372 400 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 SUCLG1P53597 346 aaKnown RBP16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 C21orf58P58505 322 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 CD226Q15762 336 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 DCST2Q5T1A1 773 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 TMEM200AQ86VY9 491 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZZZ3Q8IYH5 903 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 MEIOBQ8N635 442 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 SFXN5Q8TD22 340 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 RNASE6Q93091 150 aaKnown RBP16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 WNT2BQ93097 391 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 OR7D2Q96RA2 312 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 NPAS1Q99742 590 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 TM9SF2Q99805 663 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 SH3GL2Q99962 352 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 KLHDC3Q9BQ90 382 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 UBQLN4Q9NRR5 601 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 ITGB1BP2Q9UKP3 347 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 MAST4O15021 2626 aa16.06■□□□□ 0.16
CTDNEP1-207ENST00000572043 DNAJC13O75165 2243 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 CACNA1DQ01668 2161 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 IGLV3-32A0A0A0MS00 114 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 SYT5O00445 386 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 SDHDO14521 159 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 RCBTB2O95199 551 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 OPN1LWP04000 364 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 KIR2DL3P43628 341 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 CLDN15P56746 228 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 CLDN20P56880 219 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 CASP8Q14790 479 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 BCL2A1Q16548 175 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 SPANXN4Q5MJ08 99 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 PPP4R4Q6NUP7 873 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 C6orf120Q7Z4R8 191 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 ADGRE4PQ86SQ3 457 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 LUZP2Q86TE4 346 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 KIRREL3Q8IZU9 778 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZNF614Q8N883 585 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 PHOSPHO1Q8TCT1 267 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 MOAP1Q96BY2 351 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 TLCD1Q96CP7 247 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 LRRC46Q96FV0 321 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZNF845Q96IR2 970 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 PINK1Q9BXM7 581 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 SERHL2Q9H4I8 314 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 WDR55Q9H6Y2 383 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 THAP1Q9NVV9 213 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 KCNN3Q9UGI6 736 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 PCDHGB4Q9UN71 923 aa16.05■□□□□ 0.16
CTDNEP1-207ENST00000572043 SLC22A20A6NK97 555 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 ENO4A6NNW6 628 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 RNASET2O00584 256 aaKnown RBP16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 HCRTR2O43614 444 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 NGFRP08138 427 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 KRT16P08779 473 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 ALDOCP09972 364 aaKnown RBP16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 MATN1P21941 496 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 EPHA3P29320 983 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 PHC1P78364 1004 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 FLYWCH1Q4VC44 716 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 ATG16L1Q676U5 607 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 NXNQ6DKJ4 435 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 BHLHB9Q6PI77 547 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 OLIG3Q7RTU3 272 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 WDR75Q8IWA0 830 aaKnown RBP16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 B4GALNT2Q8NHY0 566 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 FIG4Q92562 907 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 SLC35G5Q96KT7 338 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 TEX37Q96LM6 180 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 MANSC1Q9H8J5 431 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 CRIM1Q9NZV1 1036 aa16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 PHF3Q92576 2039 aaKnown RBP16.04■□□□□ 0.16
CTDNEP1-207ENST00000572043 ANKRD28O15084 1053 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 OIP5O43482 229 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 IL18BPO95998 194 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 LCN1P31025 176 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 CPA2P48052 419 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZNF41P51814 821 aaPredicted RBP16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 UFM1P61960 85 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 NDUFAF6Q330K2 333 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 FAM174BQ3ZCQ3 159 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.03■□□□□ 0.163e-7■■■■■ 62.4
CTDNEP1-207ENST00000572043 CNEP1R1Q8N9A8 125 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 OR8J2Q8NGG1 315 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms