RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CLPTM1O96005 669 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 IGLV1-44P01699 117 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 FTH1P02794 183 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 RPN2P04844 631 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ZSCAN5DPP0CG00 497 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MMP9P14780 707 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ETS1P14921 441 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PSMA3P25788 255 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CD82P27701 267 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CD1CP29017 333 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CASQ1P31415 396 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CSTF2P33240 577 aaKnown RBP eCLIP3.57□□□□□ -1.84
NUP88-202ENST00000570937 MAGEA6P43360 314 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 KCNJ1P48048 391 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 UCNP55089 124 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 OR1D5P58170 312 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SNRPEP62304 92 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 DR1Q01658 176 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 DNAH14Q0VDD8 3507 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ILF2Q12905 390 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 PRKAA1Q13131 559 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MSLNQ13421 630 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 ITIH4Q14624 930 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 NR1D2Q14995 579 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SIX1Q15475 284 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 TRIP13Q15645 432 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 BCL7AQ4VC05 210 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 DNAJC21Q5F1R6 531 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 FAM182AQ5T1J6 154 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ZC2HC1BQ5TFG8 222 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 TTC23LQ6PF05 361 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 DET1Q7L5Y6 550 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 HOOK3Q86VS8 718 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SERPINA9Q86WD7 417 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 C17orf82Q86X59 251 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 ZNF547Q8IVP9 402 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 LMNTD2Q8IXW0 634 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CFAP206Q8IYR0 622 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CNPY4Q8N129 248 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PDIK1LQ8N165 341 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 FBXO39Q8N4B4 442 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 RAB42Q8N4Z0 105 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 BBOF1Q8ND07 529 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ZNF248Q8NDW4 579 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 OR4D9Q8NGE8 314 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 OR13C4Q8NGS5 318 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SLC37A2Q8TED4 501 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ASZ1Q8WWH4 475 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 FGF11Q92914 225 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SLCO2A1Q92959 643 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ATXN7L3BQ96GX2 97 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 DNAJC1Q96KC8 554 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 CAPZA3Q96KX2 299 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 LINC00615Q96LM1 132 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 CHCHD6Q9BRQ6 235 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 RHNO1Q9BSD3 238 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 NAT9Q9BTE0 207 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 KIFC1Q9BW19 673 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PPIL3Q9H2H8 161 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 HRH4Q9H3N8 390 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PELI2Q9HAT8 420 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MRM3Q9HC36 420 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 HHATLQ9HCP6 504 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SLC40A1Q9NP59 571 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CHRAC1Q9NRG0 131 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PTTG2Q9NZH5 202 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 ASIC3Q9UHC3 531 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PCYOX1Q9UHG3 505 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 SATB2Q9UPW6 733 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 KCNK7Q9Y2U2 307 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MAD1L1Q9Y6D9 718 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 U3KQA8 63 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 CACNA1AO00555 2505 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CABIN1Q9Y6J0 2220 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ANKRD36A6QL64 1941 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TMEM131Q92545 1883 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 IGLV3-16A0A075B6K0 115 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 IGHV1OR21-1A0A087WYE8 117 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TRBV5-4A0A0C4DH59 114 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 IGHV5-10-1A0A0J9YXX1 117 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ELOVL7A1L3X0 281 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CCDC162PA2VCL2 907 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 A6NCN8 305 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 USP27XA6NNY8 438 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KIF2AO00139 706 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 CCL22O00626 93 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 GAPDHSO14556 408 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 NVLO15381 856 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 VAPBO95292 243 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 GOT2P00505 430 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 APOA4P06727 396 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ZNF26P17031 533 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 PBLDP30039 288 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 GRIA1P42261 906 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CAPZBP47756 277 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PRLHRP49683 370 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 LIMK2P53671 638 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 MFAP4P55083 255 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ADARP55265 1226 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms