RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-240	ENST00000570253	STAC2	Q6ZMT1	411 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	CXXC5	Q7LFL8	322 aa	Known RBP	18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	SZRD1	Q7Z422	152 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	MISP	Q8IVT2	679 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	CTAGE4	Q8IX94	777 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	MDFI	Q99750	246 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	REPIN1	Q9BWE0	567 aa	Known RBP	18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	RTN4R	Q9BZR6	473 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	TIGAR	Q9NQ88	270 aa		18.87	■□□□□ 0.61
PKD1-240	ENST00000570253	SHISA8	B8ZZ34	492 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	PDPK1	O15530	556 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	CXCL13	O43927	109 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	RSL1D1	O76021	490 aa	Known RBP	18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	TP53	P04637	393 aa	Predicted RBP	18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	HSPB3	Q12988	150 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	VEZF1	Q14119	521 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	WHAMMP3	Q1A5X7	153 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	HBM	Q6B0K9	141 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	ALKBH2	Q6NS38	261 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	EXOC3L1	Q86VI1	746 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	CDRT4	Q8N9R6	151 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	OR2V1	Q8NHB1	315 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	SLC9A6	Q92581	669 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	AKAP1	Q92667	903 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	GTPBP3	Q969Y2	492 aa	Known RBP	18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	HDHD5	Q9BXW7	423 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	LAMP3	Q9UQV4	416 aa		18.86	■□□□□ 0.61
PKD1-240	ENST00000570253	ROS1	P08922	2347 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	ALG1L2	C9J202	215 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	URI1	O94763	535 aa	Predicted RBP	18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	FES	P07332	822 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	PSMB1	P20618	241 aa	Known RBP	18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	SLC6A8	P48029	635 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	PRKAG1	P54619	331 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	DMTN	Q08495	405 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	TMEM44	Q2T9K0	475 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	CFAP157	Q5JU67	520 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	TMEM201	Q5SNT2	666 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	CPTP	Q5TA50	214 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	C22orf34	Q6ZV56	151 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	OR6Y1	Q8NGX8	325 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	ACMSD	Q8TDX5	336 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	PIK3R3	Q92569	461 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	C12orf49	Q9H741	205 aa		18.85	■□□□□ 0.61
PKD1-240	ENST00000570253	PCNX3	Q9H6A9	2034 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	GXYLT2	A0PJZ3	443 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	SCD	O00767	359 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	TNFSF11	O14788	317 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	OXSR1	O95747	527 aa	Predicted RBP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	NGFR	P08138	427 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	MYL2	P10916	166 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	DDX5	P17844	614 aa	Known RBP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	IL32	P24001	234 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	LCN1	P31025	176 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	CLEC12B	Q2HXU8	276 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	GLE1	Q53GS7	698 aa	Known RBP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	NOXRED1	Q6NXP6	359 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	GALNT10	Q86SR1	603 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	CEP112	Q8N8E3	955 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	MNS1	Q8NEH6	495 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	ACTRT2	Q8TDY3	377 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	FBXW5	Q969U6	566 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	METTL2A	Q96IZ6	378 aa	Known RBP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	RNF145	Q96MT1	663 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	ESRP2	Q9H6T0	727 aa	Known RBP	18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	DCDC2	Q9UHG0	476 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	RNF115	Q9Y4L5	304 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253	FBN3	Q75N90	2809 aa		18.84	■□□□□ 0.61
PKD1-240	ENST00000570253		A0A1W2PRB8	838 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	C7orf72	A4D263	438 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	ADAMDEC1	O15204	470 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	SEC22B	O75396	215 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	CRLF1	O75462	422 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	NKX2-2	O95096	273 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	PLAU	P00749	431 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	ABHD2	P08910	425 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	IDUA	P35475	653 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	EIF1	P41567	113 aa	Known RBP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	TNK1	Q13470	666 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	RNPS1	Q15287	305 aa	Known RBP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	CTU2	Q2VPK5	515 aa	Known RBP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	TRIM46	Q7Z4K8	759 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	GATS	Q8NAP1	163 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	NUP43	Q8NFH3	380 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	IGFBPL1	Q8WX77	278 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	ZBED6CL	Q96FA7	236 aa	Predicted RBP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	ADGRG7	Q96K78	797 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	KLHL15	Q96M94	604 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	USB1	Q9BQ65	265 aa	Known RBP	18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	TMEM204	Q9BSN7	226 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	GSTO2	Q9H4Y5	243 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	MED17	Q9NVC6	651 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	USF3	Q68DE3	2245 aa		18.83	■□□□□ 0.6
PKD1-240	ENST00000570253	ZAN	Q9Y493	2812 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	GJE1	A6NN92	205 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	CLOCK	O15516	846 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	HSPA4L	O95757	839 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms