RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TAS2R60P59551 318 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 KLF10Q13118 480 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NAE1Q13564 534 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 CRTC3Q6UUV7 619 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SCD5Q86SK9 330 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SLC25A41Q8N5S1 370 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SLC5A8Q8N695 610 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PAPD5Q8NDF8 572 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 FBXO36Q8NEA4 188 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 RAB1CQ92928 201 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ARRDC3Q96B67 414 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 MYEOVQ96EZ4 313 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ALG14Q96F25 216 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 CELF6Q96J87 481 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 PLEKHA8Q96JA3 519 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 RNF145Q96MT1 663 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 RILPQ96NA2 401 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NELFAQ9H3P2 528 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 C3orf14Q9HBI5 128 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 MRPS30Q9NP92 439 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 FZD3Q9NPG1 666 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 IL26Q9NPH9 171 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SLCO3A1Q9UIG8 710 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 MTO1Q9Y2Z2 717 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 GOLGA4Q13439 2230 aaKnown RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 A0A1B0GUH1 482 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SH3PXD2BA1X283 911 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 TGFBR3LH3BV60 316 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 PRRG2O14669 202 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 RGS16O15492 202 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 BCAS1O75363 584 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 SPAG7O75391 227 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 DRD4P21917 467 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 HOXD9P28356 352 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 HSD11B1P28845 292 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ELK3P41970 407 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ESRRGP62508 458 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 STX4Q12846 297 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 BIKQ13323 160 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ZMAT1Q5H9K5 638 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 TRMT10BQ6PF06 316 aaKnown RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 KCNIP4Q6PIL6 250 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 GHDCQ8N2G8 530 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 NRG4Q8WWG1 115 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 OIT3Q8WWZ8 545 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 RTP4Q96DX8 246 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 QKIQ96PU8 341 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMG1-217ENST00000569764 KLF6Q99612 283 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 KLHDC3Q9BQ90 382 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ZNF281Q9Y2X9 895 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 POC1B-GALNT4F8VUJ3 575 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 AHSGP02765 367 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CCL2P13500 99 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 PTGER4P35408 488 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CCR2P41597 374 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ARG2P78540 354 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CAV1Q03135 178 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 IHHQ14623 411 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 HLXQ14774 488 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 CATSPER1Q8NEC5 780 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 RHEBL1Q8TAI7 183 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SCARB1Q8WTV0 552 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SERPINB12Q96P63 405 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 METTL8Q9H825 291 aaKnown RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 ANKHQ9HCJ1 492 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 HRASLS2Q9NWW9 162 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 C14orf166Q9Y224 244 aaKnown RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 CCL26Q9Y258 94 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 LAMA1P25391 3075 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 HYKKA2RU49 373 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CCSO14618 274 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ARPC3O15145 178 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 UNC5CO95185 931 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 RLN1P04808 185 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CD70P32970 193 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 FRKP42685 505 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 NSG1P42857 185 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 PGGT1BP53609 377 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SLC16A1P53985 500 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ZXDCQ2QGD7 858 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ACTBL2Q562R1 376 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 TMEM71Q6P5X7 295 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 POTEHQ6S545 545 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 LINGO4Q6UY18 593 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 Q6ZNX1 250 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 SH2D5Q6ZV89 423 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 C17orf64Q86WR6 236 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 C12orf40Q86WS4 652 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 C4orf33Q8N1A6 199 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 FAM89BQ8N5H3 189 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 TMEM185AQ8NFB2 350 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 OR2L8Q8NGY9 312 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 PAQR8Q8TEZ7 354 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms