RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 HIST1H1TP22492 207 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-208ENST00000566339 RGS8P57771 180 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-208ENST00000566339 FCN2Q15485 313 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 TEAD2Q15562 447 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 LRRK1Q38SD2 2015 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 CLEC12AQ5QGZ9 265 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 FAM205BPQ63HN1 556 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 NIPAL3Q6P499 406 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 TEX261Q6UWH6 196 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 ZNF793Q6ZN11 406 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 SLC43A2Q8N370 569 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 MCHR1Q99705 422 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 ALG8Q9BVK2 526 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 ABRACLQ9P1F3 81 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 CES1P1Q9UKY3 287 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 ZFR2Q9UPR6 939 aaKnown RBP20.15■□□□□ 0.82
SPSB3-208ENST00000566339 PLXND1Q9Y4D7 1925 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 U3KQ87 197 aa20.15■□□□□ 0.82
SPSB3-208ENST00000566339 C2orf92A0A1B0GVN3 265 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 SLC22A31A6NKX4 558 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 CTDSPLO15194 276 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 SOX30O94993 753 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 UBL3O95164 117 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 BTCP35070 178 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 MMP15P51511 669 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 PRKAG1P54619 331 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 MAP4K2Q12851 820 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 SFXN4Q6P4A7 337 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 GDF7Q7Z4P5 450 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 FGD2Q7Z6J4 655 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 PXKQ7Z7A4 578 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 NUP43Q8NFH3 380 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 OR8H1Q8NGG4 311 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 MTG2Q9H4K7 406 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 LYARQ9NX58 379 aaKnown RBP20.14■□□□□ 0.81
SPSB3-208ENST00000566339 NOTCH4Q99466 2003 aa20.14■□□□□ 0.81
SPSB3-208ENST00000566339 FGF18O76093 207 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 LINC00271P0C7V0 271 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 F3P13726 295 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 POM121L1PQ3SYA9 428 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ABHD17CQ6PCB6 329 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SAMD14Q8IZD0 417 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 HDDC3Q8N4P3 179 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 C2orf73Q8N5S3 287 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 MS4A15Q8N5U1 240 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 OR52L1Q8NGH7 329 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SORCS2Q96PQ0 1159 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 C17orf62Q9BQA9 187 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 NDC1Q9BTX1 674 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 OR51J1Q9H342 316 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 UBQLN3Q9H347 655 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 MTHFD2LQ9H903 347 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ZFP64Q9NPA5 681 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 PRDM7Q9NQW5 492 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 TRAV1-2A0A0B4J238 106 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 CCL16O15467 120 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 GSTZ1O43708 216 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 LCMT2O60294 686 aaKnown RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SC5DO75845 299 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SERPINA3P01011 423 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 THBS1P07996 1170 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SLC35G4P0C7Q5 338 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 TEAD1P28347 426 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 TRHRP34981 398 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 GCGRP47871 477 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SNRPD2P62316 118 aaKnown RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 HSF2Q03933 536 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 DYRK1AQ13627 763 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ELAVL3Q14576 367 aaKnown RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 HNRNPA1L2Q32P51 320 aaKnown RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 KLHL12Q53G59 568 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 C9orf64Q5T6V5 341 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 PIP5KL1Q5T9C9 394 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SLC22A10Q63ZE4 541 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 C16orf62Q7Z3J2 963 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ABI3BPQ7Z7G0 1075 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 VRK2Q86Y07 508 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 CPOQ8IVL8 374 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 NRMQ8IXM6 262 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SLC44A3Q8N4M1 653 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 SIRT6Q8N6T7 355 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 AMER3Q8N944 861 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 OR2L5Q8NG80 312 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 OR5W2Q8NH69 310 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 MS4A6EQ96DS6 147 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ELP4Q96EB1 424 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 CNRIP1Q96F85 164 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 ZCCHC4Q9H5U6 513 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 CTPS2Q9NRF8 586 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 BAIAP2Q9UQB8 552 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 TMEM5Q9Y2B1 443 aa20.13■□□□□ 0.81
SPSB3-208ENST00000566339 TMA7Q9Y2S6 64 aaKnown RBP20.13■□□□□ 0.81
SPSB3-208ENST00000566339 DENND4AQ7Z401 1863 aa20.12■□□□□ 0.81
SPSB3-208ENST00000566339 NINQ8N4C6 2090 aa20.12■□□□□ 0.81
SPSB3-208ENST00000566339 TBC1D3KA0A087X1G2 549 aa20.12■□□□□ 0.81
SPSB3-208ENST00000566339 A0A1W2PR48 441 aa20.12■□□□□ 0.81
SPSB3-208ENST00000566339 TBC1D3BA6NDS4 549 aa20.12■□□□□ 0.81
SPSB3-208ENST00000566339 TBC1D3FA6NER0 549 aaPredicted RBP20.12■□□□□ 0.81
SPSB3-208ENST00000566339 UNC119BA6NIH7 251 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms