RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZNF395Q9H8N7 513 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-213ENST00000565173 UBTD1Q9HAC8 227 aa7.69□□□□□ -1.18
CAPN3-213ENST00000565173 FBXO34Q9NWN3 711 aa7.69□□□□□ -1.18
CAPN3-213ENST00000565173 OXSMQ9NWU1 459 aa7.69□□□□□ -1.18
CAPN3-213ENST00000565173 MRTO4Q9UKD2 239 aaKnown RBP7.69□□□□□ -1.18
CAPN3-213ENST00000565173 PROCRQ9UNN8 238 aa7.69□□□□□ -1.18
CAPN3-213ENST00000565173 ARID1AO14497 2285 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 A0A087WZY1 265 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 A0A0J9YW62 118 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 A0A1W2PRB8 838 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 C7orf72A4D263 438 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 TRIM64A6NGJ6 449 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 TRIM64BA6NI03 449 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 FAM171A2A8MVW0 826 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 H7C1Q1 480 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SLC28A1O00337 649 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 EIF1AYO14602 144 aaKnown RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SS18L1O75177 396 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 GLRA3O75311 464 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SEC22BO75396 215 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 KCNK2O95069 426 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 OXSR1O95747 527 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 OPN1LWP04000 364 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SHBGP04278 402 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 ACP2P11117 423 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 PAX1P15863 534 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 ZNF17P17021 662 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SDC1P18827 310 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 EIF1AXP47813 144 aaKnown RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 PRKAG1P54619 331 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 RPS3AP61247 264 aaKnown RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 RAC1P63000 192 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 HSPB3Q12988 150 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 PDE7AQ13946 482 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SGCBQ16585 318 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 DUSP5Q16690 384 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 EXOC3L2Q2M3D2 409 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 PLPPR5Q32ZL2 321 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CCDC153Q494R4 210 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 MFSD12Q6NUT3 480 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 C20orf204Q6ZNR8 217 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 RNF165Q6ZSG1 346 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 YTHDF3Q7Z739 585 aaKnown RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CNPY4Q8N129 248 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 GTPBP8Q8N3Z3 284 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CDRT4Q8N9R6 151 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 OR6K3Q8NGY3 331 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 OR2T11Q8NH01 316 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 OR10D3Q8NH80 312 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 POC1BQ8TC44 478 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 GPR151Q8TDV0 419 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 ACTRT2Q8TDY3 377 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 SLC9A6Q92581 669 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 PERPQ96FX8 193 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 GMPPAQ96IJ6 420 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 Q96MF0 132 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CCL19Q99731 98 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 RHOXF2Q9BQY4 288 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 REEP4Q9H6H4 257 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 C3orf14Q9HBI5 128 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 LRTM1Q9HBL6 345 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 EQTNQ9NQ60 294 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 RRAGDQ9NQL2 400 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-213ENST00000565173 MED17Q9NVC6 651 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 C1orf109Q9NX04 203 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 BAIAP2L1Q9UHR4 511 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 CLEC4AQ9UMR7 237 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 VDAC3Q9Y277 283 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 TLN2Q9Y4G6 2542 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 HEATR5AQ86XA9 2040 aa7.68□□□□□ -1.18
CAPN3-213ENST00000565173 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 TNFSF11O14788 317 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 PDPK1O15530 556 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 AKAP10O43572 662 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 NDUFB5O43674 189 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 EFNA2O43921 213 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CRCPO75575 148 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 PLAUP00749 431 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 LINGO3P0C6S8 592 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 FCGR2AP12318 317 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CPA3P15088 417 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 SHC1P29353 583 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 GPC1P35052 558 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CCT5P48643 541 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 MANFP55145 182 aaKnown RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 SLC18A2Q05940 514 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CAPRIN1Q14444 709 aaKnown RBP7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CD226Q15762 336 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 UGT3A2Q3SY77 523 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 CFAP157Q5JU67 520 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 LIPMQ5VYY2 423 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ZCCHC12Q6PEW1 402 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 ESPNLQ6ZVH7 1005 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 PRIMA1Q86XR5 153 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 TDRPQ86YL5 185 aa7.67□□□□□ -1.18
CAPN3-213ENST00000565173 WDR75Q8IWA0 830 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms