RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CTRCQ99895 268 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 BCL7BQ9BQE9 202 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DGCR6LQ9BY27 220 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LHPPQ9H008 270 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RAB33BQ9H082 229 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 POLR2J3Q9H1A7 115 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PIGUQ9H490 435 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ANKRD19PQ9H560 264 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF768Q9H5H4 540 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ADAP2Q9NPF8 381 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PLCXD1Q9NUJ7 323 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CLN6Q9NWW5 311 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IRAK4Q9NWZ3 460 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A4GNTQ9UNA3 340 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PLCL2Q9UPR0 1127 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCDHGB1Q9Y5G3 927 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCDHGA10Q9Y5H3 936 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KCNE3Q9Y6H6 103 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SDK2Q58EX2 2172 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NUP210LQ5VU65 1888 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A0A0A6YYC8 382 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SH3D21A4FU49 640 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EFCAB10A6NFE3 127 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 H3BN98 237 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 I3L1I5 382 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AP3D1O14617 1153 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CHST10O43529 356 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR10H2O60403 315 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LDB3O75112 727 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SOX30O94993 753 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZBTB11O95625 1053 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GASTP01350 101 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 THBS1P07996 1170 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ANKRD34CP0C6C1 535 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC35E2P0CK97 266 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GSTM3P21266 225 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCMT1P22061 227 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CHMP24386 653 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PSMB9P28065 219 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 POU1F1P28069 291 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCSK6P29122 969 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AVPR1BP47901 424 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ST13P50502 369 aaKnown RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PIN1Q13526 163 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PTGES3Q15185 160 aaKnown RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SEC23BQ15437 767 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SMN1Q16637 294 aaKnown RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DUSP5Q16690 384 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TCTE1Q5JU00 501 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DCST2Q5T1A1 773 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FHL5Q5TD97 284 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GARNL3Q5VVW2 1013 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MLIPQ5VWP3 458 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PODNL1Q6PEZ8 512 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CASP12Q6UXS9 341 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CD300LDQ6UXZ3 194 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF836Q6ZNA1 936 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 WDR53Q7Z5U6 358 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COMTD1Q86VU5 262 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RANBP3LQ86VV4 465 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 VRK2Q86Y07 508 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GALNT12Q8IXK2 581 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF619Q8N2I2 560 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 VWA5B2Q8N398 1253 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DNAJC22Q8N4W6 341 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC16A11Q8NCK7 471 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TMEM52Q8NDY8 209 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR4K5Q8NGD3 323 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR6T1Q8NGN1 323 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR9A4Q8NGU2 314 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RHOXF1Q8NHV9 184 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PIGXQ8TBF5 258 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FAR1Q8WVX9 515 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PMM1Q92871 262 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR6C1Q96RD1 312 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TAAR9Q96RI9 348 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FUZQ9BT04 418 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COPS4Q9BT78 406 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DCUN1D5Q9BTE7 237 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EVA1AQ9H8M9 152 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ANKRA2Q9H9E1 313 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LIN28AQ9H9Z2 209 aaKnown RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 APMAPQ9HDC9 416 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FAM60AQ9NP50 221 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PDE7BQ9NP56 450 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KRCC1Q9NPI7 259 aaPredicted RBP6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 POLE3Q9NRF9 147 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DUSP22Q9NRW4 184 aa6.9□□□□□ -1.3
MAP1LC3B-205ENST00000564638 STARD5Q9NSY2 213 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms