RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GASTP01350 101 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 CCDC159P0C7I6 412 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 CDK4P11802 303 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 OSMP13725 252 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 KRT20P35900 424 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 GGT2P36268 569 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ADH7P40394 386 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 CLK3P49761 638 aaKnown RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 NR1H2P55055 460 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 GABARAPL2P60520 117 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 IL5RAQ01344 420 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ALDH6A1Q02252 535 aaKnown RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 TEKQ02763 1124 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 APOFQ13790 326 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 FGFBP1Q14512 234 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 C6orf141Q5SZD1 244 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 C1orf94Q6P1W5 598 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF613Q6PF04 617 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ANKRD37Q7Z713 158 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 HMGN2P46Q86SG4 172 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 PRSS58Q8IYP2 241 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 OR4K5Q8NGD3 323 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 GNPDA2Q8TDQ7 276 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ACOT11Q8WXI4 607 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ATOH1Q92858 354 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 ADIPOR1Q96A54 375 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 TP53INP1Q96A56 240 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 SLC41A3Q96GZ6 507 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 NIPSNAP1Q9BPW8 284 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 NUDT9Q9BW91 350 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 TRIM2Q9C040 744 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 FAM192AQ9GZU8 254 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 TMEM27Q9HBJ8 222 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 UBQLN4Q9NRR5 601 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 RLIMQ9NVW2 624 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 SLC39A1Q9NY26 324 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 KCNE5Q9UJ90 142 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 PPIEQ9UNP9 301 aaKnown RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 PCDHGA1Q9Y5H4 931 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 FER1L5A0AVI2 2057 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 CPSF4LA6NMK7 179 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 EIF4E1BA6NMX2 242 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 MPZL2O60487 215 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 RFPL3O75679 317 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 IGKV1D-16P01601 117 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 SMIM18P0DKX4 95 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 SLC5A2P31639 672 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 POLR2IP36954 125 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 RFX3P48380 749 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF136P52737 540 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 CRISP1P54107 249 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 CD47Q08722 323 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 TCF15Q12870 199 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 RAPSNQ13702 412 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 EBPQ15125 230 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 SEC23BQ15437 767 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 PDZK1Q5T2W1 519 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 MRPL14Q6P1L8 145 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 PGBD2Q6P3X8 592 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF730Q6ZMV8 503 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 RNF113BQ8IZP6 322 aaKnown RBP14.37□□□□□ -0.11
COMMD4-210ENST00000564587 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 B3GNT7Q8NFL0 401 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 OR4N2Q8NGD1 307 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 PIGXQ8TBF5 258 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 ADAMTS16Q8TE57 1224 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF566Q969W8 418 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 HS6ST2Q96MM7 605 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 SEMA4CQ9C0C4 833 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 APMAPQ9HDC9 416 aa14.37□□□□□ -0.11
COMMD4-210ENST00000564587 DPPA5A6NC42 116 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SERINC4A6NH21 518 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SAGE2PA6NJ88 616 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 TRIM64CA6NLI5 447 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 TPST2O60704 377 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 MRPS14O60783 128 aaKnown RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CBFA2T3O75081 653 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CYP4B1P13584 511 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 HPGDP15428 266 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 HLCSP50747 726 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CDC42P60953 191 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 TARDBPQ13148 414 aaKnown RBP eCLIP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CDK5R2Q13319 367 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SF3A2Q15428 464 aaKnown RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CSRP2Q16527 193 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 DCAF12Q5T6F0 453 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 KLHL17Q6TDP4 642 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 TMEM205Q6UW68 189 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 GDF7Q7Z4P5 450 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 OR8K3Q8NH51 312 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 GTPBP3Q969Y2 492 aaKnown RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CCNL2Q96S94 520 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 LPAR4Q99677 370 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 CRB3Q9BUF7 120 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms