RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 NSG1A0A0A6YYJ2 146 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 LOC100653049A0A140TA62 436 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 PRAMEF25A6NGN4 478 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ARGFXA6NJG6 315 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 TMEM200CA6NKL6 621 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 K7ENP7 123 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 UPK1AO00322 258 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 PEX12O00623 359 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 RRP8O43159 456 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 EMC8O43402 210 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 NME6O75414 186 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DNAJB5O75953 348 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 KRT34O76011 436 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CPSF4O95639 269 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SERPINA7P05543 415 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ANXA2P07355 339 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ZCCHC18P0CG32 403 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ITGAMP11215 1152 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 COX4I1P13073 169 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 TNNI3P19429 210 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CTSSP25774 331 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CFPP27918 469 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 PRDX6P30041 224 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 MAP3K8P41279 467 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 TRPC1P48995 793 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 EMDP50402 254 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SUMO3P55854 103 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 KCNK10P57789 538 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CHAF1BQ13112 559 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 RAB39AQ14964 217 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 EBPQ15125 230 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 EXT1Q16394 746 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 MAPKAPK3Q16644 382 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DEFB109BQ30KR1 87 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 COQ5Q5HYK3 327 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DCAF10Q5QP82 559 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 LRIF1Q5T3J3 769 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SAXO2Q658L1 398 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 REP15Q6BDI9 236 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 LIN54Q6MZP7 749 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 INO80CQ6PI98 192 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 TEPPQ6URK8 271 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 C6orf89Q6UWU4 347 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DLEU7Q6UYE1 221 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 C9orf40Q8IXQ3 194 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CLEC4FQ8N1N0 589 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR2L13Q8N349 312 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DPP10Q8N608 796 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 B3GNT7Q8NFL0 401 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR7G1Q8NGA0 311 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR52R1Q8NGF1 315 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR4A15Q8NGL6 344 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR1N1Q8NGS0 311 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 M1APQ8TC57 530 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SFXN5Q8TD22 340 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ZFP90Q8TF47 636 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 THAP4Q8WY91 577 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 PSMF1Q92530 271 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 HTRA1Q92743 480 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DACT3Q96B18 629 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SDCCAG3Q96C92 435 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 RCN3Q96D15 328 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 FAM120BQ96EK7 910 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 GIMAP5Q96F15 307 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 VMP1Q96GC9 406 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 AURKBQ96GD4 344 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 RBM18Q96H35 190 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 ITCHQ96J02 903 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 VSTM2LQ96N03 204 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 LRRC37BQ96QE4 947 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 BARD1Q99728 777 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 NPAS2Q99743 824 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CPPED1Q9BRF8 314 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CENPOQ9BU64 300 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC25A23Q9BV35 468 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 OR8D2Q9GZM6 311 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SERHL2Q9H4I8 314 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CPNE5Q9HCH3 593 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 MMP25Q9NPA2 562 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 TAS2R9Q9NYW1 312 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC25A37Q9NYZ2 338 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 PTGFRNQ9P2B2 879 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 LEF1Q9UJU2 399 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 C19orf53Q9UNZ5 99 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 DTX4Q9Y2E6 619 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 CLCA3PQ9Y6N3 262 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 URB1O60287 2271 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 KALRNO60229 2985 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 A0A0A6YYJ9 748 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 TRBV11-1A0A0K0K1C0 115 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 RNF103-CHMP3A0A140T963 221 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 OR6C76A6NM76 312 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 BBIP1A8MTZ0 92 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 H3BUI4 141 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 ACOT7O00154 380 aa4.79□□□□□ -1.64
HERPUD1-207ENST00000563781 RFXANKO14593 260 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms