RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 BHLHB9Q6PI77 547 aa25.64■■□□□ 1.7
NME3-203ENST00000563367 LIX1LQ8IVB5 337 aa25.64■■□□□ 1.7
NME3-203ENST00000563367 VPS37AQ8NEZ2 397 aa25.64■■□□□ 1.7
NME3-203ENST00000563367 UBQLN4Q9NRR5 601 aa25.64■■□□□ 1.7
NME3-203ENST00000563367 HNRNPRO43390 633 aaKnown RBP25.63■■□□□ 1.69
NME3-203ENST00000563367 NDUFB5O43674 189 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 MATN1P21941 496 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 CHMP24386 653 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 ZFP36L2P47974 494 aaKnown RBP25.63■■□□□ 1.69
NME3-203ENST00000563367 LHX2P50458 406 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 CASP9P55211 416 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 PPP2R2AP63151 447 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 SRYQ05066 204 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 EPGNQ6UW88 154 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 ENPP6Q6UWR7 440 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 TNIP2Q8NFZ5 429 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 MARVELD3Q96A59 401 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 C1GALT1C1Q96EU7 318 aa25.63■■□□□ 1.69
NME3-203ENST00000563367 NPIPA5A0A0B4J1W7 369 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 NPIPA7E9PJI5 369 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 DIAPH2O60879 1101 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 SOX30O94993 753 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 C1QCP02747 245 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 SNRPB2P08579 225 aaKnown RBP25.62■■□□□ 1.69
NME3-203ENST00000563367 NPIPA8P0DM63 369 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 UQCRC2P22695 453 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 GANABQ14697 944 aaKnown RBP25.62■■□□□ 1.69
NME3-203ENST00000563367 PDCD4Q53EL6 469 aaKnown RBP25.62■■□□□ 1.69
NME3-203ENST00000563367 NSUN5P2Q63ZY6 315 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 AAGABQ6PD74 315 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 NAXEQ8NCW5 288 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 OR5M1Q8NGP8 315 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 SLC35G5Q96KT7 338 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 CCDC115Q96NT0 180 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 TRIB1Q96RU8 372 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 TUBA1CQ9BQE3 449 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 PTGES2Q9H7Z7 377 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 BTNL2Q9UIR0 455 aa25.62■■□□□ 1.69
NME3-203ENST00000563367 PGRP06401 933 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 IDO1P14902 403 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 ATP6V1C1P21283 382 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 CLDN18P56856 261 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 TFF3Q07654 80 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 ARSKQ6UWY0 536 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 LACC1Q8IV20 430 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 ZPLD1Q8TCW7 415 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 DYDC1Q8WWB3 177 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 INPP5KQ9BT40 448 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 INTS9Q9NV88 658 aaKnown RBP25.61■■□□□ 1.69
NME3-203ENST00000563367 HEATR5AQ86XA9 2040 aa25.61■■□□□ 1.69
NME3-203ENST00000563367 CD8B2A6NJW9 211 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 SCDO00767 359 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 HPGDP15428 266 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 ZNF708P17019 499 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 CEACAM8P31997 349 aaPredicted RBP25.6■■□□□ 1.69
NME3-203ENST00000563367 CD226Q15762 336 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 RAET1LQ5VY80 246 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 SAXO2Q658L1 398 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 GOT1L1Q8NHS2 421 aaPredicted RBP25.6■■□□□ 1.69
NME3-203ENST00000563367 OR52E6Q96RD3 313 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 SDF2Q99470 211 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 ZBTB18Q99592 522 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 KLHDC3Q9BQ90 382 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 OR51I1Q9H343 314 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 KCNJ16Q9NPI9 418 aa25.6■■□□□ 1.69
NME3-203ENST00000563367 A0A1W2PQD3 144 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 FAM47E-STBD1D6RA91 191 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 H0Y3Z8 333 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 SLC22A3O75751 556 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 PRF1P14222 555 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 TIMP3P35625 211 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 CDKN2CP42773 168 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 RNF144AP50876 292 aaPredicted RBP25.59■■□□□ 1.69
NME3-203ENST00000563367 SF3B4Q15427 424 aaKnown RBP eCLIP25.59■■□□□ 1.692e-10■■■■■ 29.7
NME3-203ENST00000563367 GSTA3Q16772 222 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.59■■□□□ 1.69
NME3-203ENST00000563367 PLXDC2Q6UX71 529 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 MIPOL1Q8TD10 442 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 CALHM2Q9HA72 323 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 NPDC1Q9NQX5 325 aaPredicted RBP25.59■■□□□ 1.69
NME3-203ENST00000563367 SDR39U1Q9NRG7 319 aaPredicted RBP25.59■■□□□ 1.69
NME3-203ENST00000563367 ZNF337Q9Y3M9 751 aa25.59■■□□□ 1.69
NME3-203ENST00000563367 OR2M5A3KFT3 312 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 DUXAA6NLW8 204 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 HSPB2A8KAH6 182 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 SHISA8B8ZZ34 492 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 NPIPB9F8W1W9 429 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 UBDO15205 165 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 COX6B1P14854 86 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 RCAN2Q14206 197 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 HSPB2Q16082 182 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 FLYWCH1Q4VC44 716 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 KLHL26Q53HC5 615 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 OLIG3Q7RTU3 272 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 ADGRE4PQ86SQ3 457 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 ACBD4Q8NC06 268 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 GLB1L3Q8NCI6 653 aaPredicted RBP25.58■■□□□ 1.69
NME3-203ENST00000563367 CHDHQ8NE62 594 aaPredicted RBP25.58■■□□□ 1.69
NME3-203ENST00000563367 NEURL3Q96EH8 262 aa25.58■■□□□ 1.69
NME3-203ENST00000563367 SH3YL1Q96HL8 342 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms